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Complete chloroplast genome sequence of Acer sutchuenense subsp. tienchuanenge (Sapindaceae)

Acer sutchuenense subsp. tienchuanenge (Sapindaceae: Acer) is an endangered deciduous arbor species and endemic to China. Being obtained by using genome Illumina pair-end sequencing data, the complete chloroplast genome of A. sutchuenense subsp. tienchuanenge had a typical quadripartite structure, w...

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Autores principales: Zhang, Wei, Xia, Xinhe, Chen, Difei, Li, Jiayong, He, Wei, Ma, Wenbao, Wu, Bixian, Zheng, Yongqi, Zhang, Chuanhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781949/
https://www.ncbi.nlm.nih.gov/pubmed/33457988
http://dx.doi.org/10.1080/23802359.2020.1791002
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author Zhang, Wei
Xia, Xinhe
Chen, Difei
Li, Jiayong
He, Wei
Ma, Wenbao
Wu, Bixian
Zheng, Yongqi
Zhang, Chuanhong
author_facet Zhang, Wei
Xia, Xinhe
Chen, Difei
Li, Jiayong
He, Wei
Ma, Wenbao
Wu, Bixian
Zheng, Yongqi
Zhang, Chuanhong
author_sort Zhang, Wei
collection PubMed
description Acer sutchuenense subsp. tienchuanenge (Sapindaceae: Acer) is an endangered deciduous arbor species and endemic to China. Being obtained by using genome Illumina pair-end sequencing data, the complete chloroplast genome of A. sutchuenense subsp. tienchuanenge had a typical quadripartite structure, with 156,063 bp long, including a large single-copy (LSC) region of 85,772 bp, a small single-copy (SSC) region of 18,117 bp, and a pair of inverted repeats (IRs) (each 26,087 bp in length). A total of 136 genes were annotated, of which 113 are unique genes, including 30 tRNAs, 4 rRNAs, and 79 protein-coding genes. The overall GC content was 37.9%. The phylogenetic analysis suggested that A. sutchuenense subsp. tienchuanenge was the most closely related to A. griseum and A. triflorum. The complete chloroplast genome of A. sutchuenense subsp. tienchuanenge is valuable for assessment and conservation of genetic resources and further for phylogenetic study of Acer L.
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spelling pubmed-77819492021-01-14 Complete chloroplast genome sequence of Acer sutchuenense subsp. tienchuanenge (Sapindaceae) Zhang, Wei Xia, Xinhe Chen, Difei Li, Jiayong He, Wei Ma, Wenbao Wu, Bixian Zheng, Yongqi Zhang, Chuanhong Mitochondrial DNA B Resour Mitogenome Announcement Acer sutchuenense subsp. tienchuanenge (Sapindaceae: Acer) is an endangered deciduous arbor species and endemic to China. Being obtained by using genome Illumina pair-end sequencing data, the complete chloroplast genome of A. sutchuenense subsp. tienchuanenge had a typical quadripartite structure, with 156,063 bp long, including a large single-copy (LSC) region of 85,772 bp, a small single-copy (SSC) region of 18,117 bp, and a pair of inverted repeats (IRs) (each 26,087 bp in length). A total of 136 genes were annotated, of which 113 are unique genes, including 30 tRNAs, 4 rRNAs, and 79 protein-coding genes. The overall GC content was 37.9%. The phylogenetic analysis suggested that A. sutchuenense subsp. tienchuanenge was the most closely related to A. griseum and A. triflorum. The complete chloroplast genome of A. sutchuenense subsp. tienchuanenge is valuable for assessment and conservation of genetic resources and further for phylogenetic study of Acer L. Taylor & Francis 2020-07-20 /pmc/articles/PMC7781949/ /pubmed/33457988 http://dx.doi.org/10.1080/23802359.2020.1791002 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Wei
Xia, Xinhe
Chen, Difei
Li, Jiayong
He, Wei
Ma, Wenbao
Wu, Bixian
Zheng, Yongqi
Zhang, Chuanhong
Complete chloroplast genome sequence of Acer sutchuenense subsp. tienchuanenge (Sapindaceae)
title Complete chloroplast genome sequence of Acer sutchuenense subsp. tienchuanenge (Sapindaceae)
title_full Complete chloroplast genome sequence of Acer sutchuenense subsp. tienchuanenge (Sapindaceae)
title_fullStr Complete chloroplast genome sequence of Acer sutchuenense subsp. tienchuanenge (Sapindaceae)
title_full_unstemmed Complete chloroplast genome sequence of Acer sutchuenense subsp. tienchuanenge (Sapindaceae)
title_short Complete chloroplast genome sequence of Acer sutchuenense subsp. tienchuanenge (Sapindaceae)
title_sort complete chloroplast genome sequence of acer sutchuenense subsp. tienchuanenge (sapindaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781949/
https://www.ncbi.nlm.nih.gov/pubmed/33457988
http://dx.doi.org/10.1080/23802359.2020.1791002
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