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The complete chloroplast genome sequence of Lirianthe hodgsonii, a tree species of Magnoliaceae as least concern

Lirianthe hodgsonii is a tree species of Magnoliaceae as least concern. In the present paper, the complete chloroplast genome (cpDNA) and basic annotated information of L. hodgsonii were reported and its phylogenetic relationship with other species in Magnoliaceae was analyzed. The size of its compl...

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Autores principales: Chen, Shao-Yu, Wu, Tao, Ma, Hui-Fen, Fu, Yu-Pin, Zhu, Yun-Feng, Hao, Jia-Bo, Jiang, Hong, Sima, Yong-Kang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781970/
https://www.ncbi.nlm.nih.gov/pubmed/33458060
http://dx.doi.org/10.1080/23802359.2020.1798296
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author Chen, Shao-Yu
Wu, Tao
Ma, Hui-Fen
Fu, Yu-Pin
Zhu, Yun-Feng
Hao, Jia-Bo
Jiang, Hong
Sima, Yong-Kang
author_facet Chen, Shao-Yu
Wu, Tao
Ma, Hui-Fen
Fu, Yu-Pin
Zhu, Yun-Feng
Hao, Jia-Bo
Jiang, Hong
Sima, Yong-Kang
author_sort Chen, Shao-Yu
collection PubMed
description Lirianthe hodgsonii is a tree species of Magnoliaceae as least concern. In the present paper, the complete chloroplast genome (cpDNA) and basic annotated information of L. hodgsonii were reported and its phylogenetic relationship with other species in Magnoliaceae was analyzed. The size of its complete cpDNA is 159,693 bp, with a typical quadripartite structure comprising a pair of inverted repeat (IR) regions of 26,546 bp, a large single-copy (LSC) region of 87,848 bp and a small single-copy (SSC) region of 18,753 bp. The genome contains 131 unique genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that L. hodgsonii is affinal to Lirianthe bidoupensis and they form a monophyletic group with other seven Lirianthe species. This Lirianthe clade is sister to the Dugandiodendron and Talauma clade with high support. All genera mentioned in this analysis are monophyletic under the system of Magnoliaceae by Sima and Lu.
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spelling pubmed-77819702021-01-14 The complete chloroplast genome sequence of Lirianthe hodgsonii, a tree species of Magnoliaceae as least concern Chen, Shao-Yu Wu, Tao Ma, Hui-Fen Fu, Yu-Pin Zhu, Yun-Feng Hao, Jia-Bo Jiang, Hong Sima, Yong-Kang Mitochondrial DNA B Resour Mitogenome Announcement Lirianthe hodgsonii is a tree species of Magnoliaceae as least concern. In the present paper, the complete chloroplast genome (cpDNA) and basic annotated information of L. hodgsonii were reported and its phylogenetic relationship with other species in Magnoliaceae was analyzed. The size of its complete cpDNA is 159,693 bp, with a typical quadripartite structure comprising a pair of inverted repeat (IR) regions of 26,546 bp, a large single-copy (LSC) region of 87,848 bp and a small single-copy (SSC) region of 18,753 bp. The genome contains 131 unique genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that L. hodgsonii is affinal to Lirianthe bidoupensis and they form a monophyletic group with other seven Lirianthe species. This Lirianthe clade is sister to the Dugandiodendron and Talauma clade with high support. All genera mentioned in this analysis are monophyletic under the system of Magnoliaceae by Sima and Lu. Taylor & Francis 2020-07-29 /pmc/articles/PMC7781970/ /pubmed/33458060 http://dx.doi.org/10.1080/23802359.2020.1798296 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Chen, Shao-Yu
Wu, Tao
Ma, Hui-Fen
Fu, Yu-Pin
Zhu, Yun-Feng
Hao, Jia-Bo
Jiang, Hong
Sima, Yong-Kang
The complete chloroplast genome sequence of Lirianthe hodgsonii, a tree species of Magnoliaceae as least concern
title The complete chloroplast genome sequence of Lirianthe hodgsonii, a tree species of Magnoliaceae as least concern
title_full The complete chloroplast genome sequence of Lirianthe hodgsonii, a tree species of Magnoliaceae as least concern
title_fullStr The complete chloroplast genome sequence of Lirianthe hodgsonii, a tree species of Magnoliaceae as least concern
title_full_unstemmed The complete chloroplast genome sequence of Lirianthe hodgsonii, a tree species of Magnoliaceae as least concern
title_short The complete chloroplast genome sequence of Lirianthe hodgsonii, a tree species of Magnoliaceae as least concern
title_sort complete chloroplast genome sequence of lirianthe hodgsonii, a tree species of magnoliaceae as least concern
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781970/
https://www.ncbi.nlm.nih.gov/pubmed/33458060
http://dx.doi.org/10.1080/23802359.2020.1798296
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