Cargando…
Complete chloroplast genome sequence of an ornamental grass Muhlenbergia capillaries (Poaceae: Chloridoideae)
Muhlenbergia capillaris (Lam.) Trin. is an ornamental grass belonging to the genus Muhlenbergia Schreb. in the family Poaceae. To better understand its phylogenetic relationship with respect to the other species in the tribe Chloridoideae, the first complete chloroplast genome of Muhlenbergia was de...
Autor principal: | |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781977/ https://www.ncbi.nlm.nih.gov/pubmed/33457747 http://dx.doi.org/10.1080/23802359.2020.1764403 |
_version_ | 1783631792807346176 |
---|---|
author | Wang, Qi |
author_facet | Wang, Qi |
author_sort | Wang, Qi |
collection | PubMed |
description | Muhlenbergia capillaris (Lam.) Trin. is an ornamental grass belonging to the genus Muhlenbergia Schreb. in the family Poaceae. To better understand its phylogenetic relationship with respect to the other species in the tribe Chloridoideae, the first complete chloroplast genome of Muhlenbergia was determined. The complete chloroplast genome of Muhlenbergia capillaris is 134,907 bp in length, consisting of one large single-copy (LSC) region of 80,175 bp, one small single-copy (SSC) region of 12,706 bp, and a pair of inverted repeat (IR) regions of 21,013 bp. The overall GC content of the genome is 38.1%. Further, maximum likelihood phylogenetic analysis with TVM + F+R3 model was conducted using 28 complete plastomes of the Poaceae, which support close relationships among species of Muhlenbergia, Hilaria Kunth, Distichlis Raf., and Bouteloua Lag., followed by those of Tragus Haller. |
format | Online Article Text |
id | pubmed-7781977 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77819772021-01-14 Complete chloroplast genome sequence of an ornamental grass Muhlenbergia capillaries (Poaceae: Chloridoideae) Wang, Qi Mitochondrial DNA B Resour Mitogenome Announcement Muhlenbergia capillaris (Lam.) Trin. is an ornamental grass belonging to the genus Muhlenbergia Schreb. in the family Poaceae. To better understand its phylogenetic relationship with respect to the other species in the tribe Chloridoideae, the first complete chloroplast genome of Muhlenbergia was determined. The complete chloroplast genome of Muhlenbergia capillaris is 134,907 bp in length, consisting of one large single-copy (LSC) region of 80,175 bp, one small single-copy (SSC) region of 12,706 bp, and a pair of inverted repeat (IR) regions of 21,013 bp. The overall GC content of the genome is 38.1%. Further, maximum likelihood phylogenetic analysis with TVM + F+R3 model was conducted using 28 complete plastomes of the Poaceae, which support close relationships among species of Muhlenbergia, Hilaria Kunth, Distichlis Raf., and Bouteloua Lag., followed by those of Tragus Haller. Taylor & Francis 2020-05-13 /pmc/articles/PMC7781977/ /pubmed/33457747 http://dx.doi.org/10.1080/23802359.2020.1764403 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Wang, Qi Complete chloroplast genome sequence of an ornamental grass Muhlenbergia capillaries (Poaceae: Chloridoideae) |
title | Complete chloroplast genome sequence of an ornamental grass Muhlenbergia capillaries (Poaceae: Chloridoideae) |
title_full | Complete chloroplast genome sequence of an ornamental grass Muhlenbergia capillaries (Poaceae: Chloridoideae) |
title_fullStr | Complete chloroplast genome sequence of an ornamental grass Muhlenbergia capillaries (Poaceae: Chloridoideae) |
title_full_unstemmed | Complete chloroplast genome sequence of an ornamental grass Muhlenbergia capillaries (Poaceae: Chloridoideae) |
title_short | Complete chloroplast genome sequence of an ornamental grass Muhlenbergia capillaries (Poaceae: Chloridoideae) |
title_sort | complete chloroplast genome sequence of an ornamental grass muhlenbergia capillaries (poaceae: chloridoideae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781977/ https://www.ncbi.nlm.nih.gov/pubmed/33457747 http://dx.doi.org/10.1080/23802359.2020.1764403 |
work_keys_str_mv | AT wangqi completechloroplastgenomesequenceofanornamentalgrassmuhlenbergiacapillariespoaceaechloridoideae |