Characterization of the complete chloroplast genome of Pyrus pyrifolia ‘Yunhongli No. 1’

‘Yunhongli No. 1’ is a rare and well-colored red pear (Pyrus pyrifolia) germplasm resource, and is popular in the market due to its bright red color and high quality. This study used Illumina high-throughput sequencing technologies for red pear ‘Yunhongli No. 1’ of chloroplast genome sequencing and...

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Autores principales: Cheng, Longjie, Wang, Yuying, Yang, Jin, He, Yingyun, Li, Guochang, Ma, Weirong, Huang, Xinglong, Su, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781984/
https://www.ncbi.nlm.nih.gov/pubmed/33458073
http://dx.doi.org/10.1080/23802359.2020.1800429
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author Cheng, Longjie
Wang, Yuying
Yang, Jin
He, Yingyun
Li, Guochang
Ma, Weirong
Huang, Xinglong
Su, Jun
author_facet Cheng, Longjie
Wang, Yuying
Yang, Jin
He, Yingyun
Li, Guochang
Ma, Weirong
Huang, Xinglong
Su, Jun
author_sort Cheng, Longjie
collection PubMed
description ‘Yunhongli No. 1’ is a rare and well-colored red pear (Pyrus pyrifolia) germplasm resource, and is popular in the market due to its bright red color and high quality. This study used Illumina high-throughput sequencing technologies for red pear ‘Yunhongli No. 1’ of chloroplast genome sequencing and analysis. The genome features of P. pyrifolia ‘Yunhongli No. 1’ and the phylogenetic relationships were reported and established. The complete chloroplast genome is 160,113 bp in length, consisting of a pair of inverse duplication regions 26,386 bp, a large single-copy region 88,052 bp, and a small single-copy region 19,214 bp. The entire genome contains 80 messenger RNA (mRNA) genes, 30 transfer RNA (tRNA) genes, and 4 ribosomal RNA (rRNA) genes. The phylogenetic tree of 15 Rosaceae species revealed red pear ‘Yunhongli No. 1’ is more closely related to Pyrus communis × P. pyrifolia ‘Greensis.’
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spelling pubmed-77819842021-01-14 Characterization of the complete chloroplast genome of Pyrus pyrifolia ‘Yunhongli No. 1’ Cheng, Longjie Wang, Yuying Yang, Jin He, Yingyun Li, Guochang Ma, Weirong Huang, Xinglong Su, Jun Mitochondrial DNA B Resour Mitogenome Announcement ‘Yunhongli No. 1’ is a rare and well-colored red pear (Pyrus pyrifolia) germplasm resource, and is popular in the market due to its bright red color and high quality. This study used Illumina high-throughput sequencing technologies for red pear ‘Yunhongli No. 1’ of chloroplast genome sequencing and analysis. The genome features of P. pyrifolia ‘Yunhongli No. 1’ and the phylogenetic relationships were reported and established. The complete chloroplast genome is 160,113 bp in length, consisting of a pair of inverse duplication regions 26,386 bp, a large single-copy region 88,052 bp, and a small single-copy region 19,214 bp. The entire genome contains 80 messenger RNA (mRNA) genes, 30 transfer RNA (tRNA) genes, and 4 ribosomal RNA (rRNA) genes. The phylogenetic tree of 15 Rosaceae species revealed red pear ‘Yunhongli No. 1’ is more closely related to Pyrus communis × P. pyrifolia ‘Greensis.’ Taylor & Francis 2020-07-30 /pmc/articles/PMC7781984/ /pubmed/33458073 http://dx.doi.org/10.1080/23802359.2020.1800429 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Cheng, Longjie
Wang, Yuying
Yang, Jin
He, Yingyun
Li, Guochang
Ma, Weirong
Huang, Xinglong
Su, Jun
Characterization of the complete chloroplast genome of Pyrus pyrifolia ‘Yunhongli No. 1’
title Characterization of the complete chloroplast genome of Pyrus pyrifolia ‘Yunhongli No. 1’
title_full Characterization of the complete chloroplast genome of Pyrus pyrifolia ‘Yunhongli No. 1’
title_fullStr Characterization of the complete chloroplast genome of Pyrus pyrifolia ‘Yunhongli No. 1’
title_full_unstemmed Characterization of the complete chloroplast genome of Pyrus pyrifolia ‘Yunhongli No. 1’
title_short Characterization of the complete chloroplast genome of Pyrus pyrifolia ‘Yunhongli No. 1’
title_sort characterization of the complete chloroplast genome of pyrus pyrifolia ‘yunhongli no. 1’
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781984/
https://www.ncbi.nlm.nih.gov/pubmed/33458073
http://dx.doi.org/10.1080/23802359.2020.1800429
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