The complete chloroplast genome sequence of Castanopsis sclerophylla (Lindl.) Schott (Fagaceae)

Castanopsis sclerophylla (Lindl.) Schott is one of the National Class II protected plants, and an important species in subtropical evergreen forests in China. The object of this work was to thoroughly explore the complete chloroplast (cp) genome of C. sclerophylla using next-generation sequencing. T...

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Autores principales: Miao, Jing, Wang, Yabo, Zhang, Yaoqin, Tong, Lili, Tang, Gengguo, Xu, Xiaogang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781992/
https://www.ncbi.nlm.nih.gov/pubmed/33457973
http://dx.doi.org/10.1080/23802359.2020.1790324
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author Miao, Jing
Wang, Yabo
Zhang, Yaoqin
Tong, Lili
Tang, Gengguo
Xu, Xiaogang
author_facet Miao, Jing
Wang, Yabo
Zhang, Yaoqin
Tong, Lili
Tang, Gengguo
Xu, Xiaogang
author_sort Miao, Jing
collection PubMed
description Castanopsis sclerophylla (Lindl.) Schott is one of the National Class II protected plants, and an important species in subtropical evergreen forests in China. The object of this work was to thoroughly explore the complete chloroplast (cp) genome of C. sclerophylla using next-generation sequencing. The circular complete cp genome of C. sclerophylla is 160,519 bp in length, containing a large single-copy (LSC) region of 90,243 bp, and a small single-copy (SSC) region of 18,976 bp. It comprises 131 genes, including 8 rRNA genes, 37 tRNAs genes, and 85 protein-coding genes. The GC content of C. sclerophylla cp genome is 36.81%. The phylogenetic analysis suggests that C. sclerophylla is a sister species to C. fargesii in Fagaceae.
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spelling pubmed-77819922021-01-14 The complete chloroplast genome sequence of Castanopsis sclerophylla (Lindl.) Schott (Fagaceae) Miao, Jing Wang, Yabo Zhang, Yaoqin Tong, Lili Tang, Gengguo Xu, Xiaogang Mitochondrial DNA B Resour Mitogenome Announcement Castanopsis sclerophylla (Lindl.) Schott is one of the National Class II protected plants, and an important species in subtropical evergreen forests in China. The object of this work was to thoroughly explore the complete chloroplast (cp) genome of C. sclerophylla using next-generation sequencing. The circular complete cp genome of C. sclerophylla is 160,519 bp in length, containing a large single-copy (LSC) region of 90,243 bp, and a small single-copy (SSC) region of 18,976 bp. It comprises 131 genes, including 8 rRNA genes, 37 tRNAs genes, and 85 protein-coding genes. The GC content of C. sclerophylla cp genome is 36.81%. The phylogenetic analysis suggests that C. sclerophylla is a sister species to C. fargesii in Fagaceae. Taylor & Francis 2020-07-15 /pmc/articles/PMC7781992/ /pubmed/33457973 http://dx.doi.org/10.1080/23802359.2020.1790324 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Miao, Jing
Wang, Yabo
Zhang, Yaoqin
Tong, Lili
Tang, Gengguo
Xu, Xiaogang
The complete chloroplast genome sequence of Castanopsis sclerophylla (Lindl.) Schott (Fagaceae)
title The complete chloroplast genome sequence of Castanopsis sclerophylla (Lindl.) Schott (Fagaceae)
title_full The complete chloroplast genome sequence of Castanopsis sclerophylla (Lindl.) Schott (Fagaceae)
title_fullStr The complete chloroplast genome sequence of Castanopsis sclerophylla (Lindl.) Schott (Fagaceae)
title_full_unstemmed The complete chloroplast genome sequence of Castanopsis sclerophylla (Lindl.) Schott (Fagaceae)
title_short The complete chloroplast genome sequence of Castanopsis sclerophylla (Lindl.) Schott (Fagaceae)
title_sort complete chloroplast genome sequence of castanopsis sclerophylla (lindl.) schott (fagaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781992/
https://www.ncbi.nlm.nih.gov/pubmed/33457973
http://dx.doi.org/10.1080/23802359.2020.1790324
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