The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae

Bryophytes are a highly diverse group containing more than 12,800 species. Haplocladium microphyllum is in a large moss belonging to the family Thuidiaceae. We report the complete chloroplast (124,478 bp) genome sequence of H. microphyllum, it includes a pair of inverted repeat regions (IRs, 9727 bp...

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Autores principales: Mao, Lihui, Ding, Huaqiao, Dong, Qing, Tian, Danqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781994/
https://www.ncbi.nlm.nih.gov/pubmed/33457958
http://dx.doi.org/10.1080/23802359.2020.1789006
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author Mao, Lihui
Ding, Huaqiao
Dong, Qing
Tian, Danqing
author_facet Mao, Lihui
Ding, Huaqiao
Dong, Qing
Tian, Danqing
author_sort Mao, Lihui
collection PubMed
description Bryophytes are a highly diverse group containing more than 12,800 species. Haplocladium microphyllum is in a large moss belonging to the family Thuidiaceae. We report the complete chloroplast (124,478 bp) genome sequence of H. microphyllum, it includes a pair of inverted repeat regions (IRs, 9727 bp), one large single-copy (LSC, 86,528 bp) region, and one small single-copy (SSC, 18,496 bp) region. Besides, the complete chloroplast genome contains 134 genes in total, including 88 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that H. microphyllum has the closest relationship with Sanionia uncinata in Amblystegiaceae. Our study lays a foundation for further research like speciation of this species and the phylogeny of the Thuidiaceae family.
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spelling pubmed-77819942021-01-14 The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae Mao, Lihui Ding, Huaqiao Dong, Qing Tian, Danqing Mitochondrial DNA B Resour Mitogenome Announcement Bryophytes are a highly diverse group containing more than 12,800 species. Haplocladium microphyllum is in a large moss belonging to the family Thuidiaceae. We report the complete chloroplast (124,478 bp) genome sequence of H. microphyllum, it includes a pair of inverted repeat regions (IRs, 9727 bp), one large single-copy (LSC, 86,528 bp) region, and one small single-copy (SSC, 18,496 bp) region. Besides, the complete chloroplast genome contains 134 genes in total, including 88 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that H. microphyllum has the closest relationship with Sanionia uncinata in Amblystegiaceae. Our study lays a foundation for further research like speciation of this species and the phylogeny of the Thuidiaceae family. Taylor & Francis 2020-07-15 /pmc/articles/PMC7781994/ /pubmed/33457958 http://dx.doi.org/10.1080/23802359.2020.1789006 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Mao, Lihui
Ding, Huaqiao
Dong, Qing
Tian, Danqing
The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae
title The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae
title_full The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae
title_fullStr The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae
title_full_unstemmed The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae
title_short The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae
title_sort chloroplast genome of the moss haplocladium microphyllum, first in family thuidiaceae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7781994/
https://www.ncbi.nlm.nih.gov/pubmed/33457958
http://dx.doi.org/10.1080/23802359.2020.1789006
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