The complete chloroplast genome of Saccharina latissima

Saccharina latissima is a brown algal (class Phaeophyceae) belonging to the family Laminariaceae. We reported the de novo assembly and the annotation of the complete chloroplast genome of S. latissima. The circled cpDNA of S. latissima is 130,619 bp in length with a large and a small single-copy reg...

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Detalles Bibliográficos
Autores principales: Fan, Xiao, Xie, Weifeng, Wang, Yitao, Xu, Dong, Zhang, Xiaowen, Ye, Naihao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782001/
https://www.ncbi.nlm.nih.gov/pubmed/33458211
http://dx.doi.org/10.1080/23802359.2020.1825999
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author Fan, Xiao
Xie, Weifeng
Wang, Yitao
Xu, Dong
Zhang, Xiaowen
Ye, Naihao
author_facet Fan, Xiao
Xie, Weifeng
Wang, Yitao
Xu, Dong
Zhang, Xiaowen
Ye, Naihao
author_sort Fan, Xiao
collection PubMed
description Saccharina latissima is a brown algal (class Phaeophyceae) belonging to the family Laminariaceae. We reported the de novo assembly and the annotation of the complete chloroplast genome of S. latissima. The circled cpDNA of S. latissima is 130,619 bp in length with a large and a small single-copy region (LSC and SSC), separated by two copies of inverted repeats (IRa and IRb). The genome contains 139 protein-coding genes (PCGs), 3 kinds of ribosomal RNAs (rRNAs), and 29 transfer RNAs (tRNAs) genes that are typical of Saccharina cpDNA. A phylogenetic analysis strongly supported the close phylogenetic affinity of S. latissima and Saccharina japonica. The complete cpDNA of S. latissima will provide valuable molecular data for further analysis of evolutionary and conservation genetic resources.
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spelling pubmed-77820012021-01-14 The complete chloroplast genome of Saccharina latissima Fan, Xiao Xie, Weifeng Wang, Yitao Xu, Dong Zhang, Xiaowen Ye, Naihao Mitochondrial DNA B Resour Mitogenome Announcement Saccharina latissima is a brown algal (class Phaeophyceae) belonging to the family Laminariaceae. We reported the de novo assembly and the annotation of the complete chloroplast genome of S. latissima. The circled cpDNA of S. latissima is 130,619 bp in length with a large and a small single-copy region (LSC and SSC), separated by two copies of inverted repeats (IRa and IRb). The genome contains 139 protein-coding genes (PCGs), 3 kinds of ribosomal RNAs (rRNAs), and 29 transfer RNAs (tRNAs) genes that are typical of Saccharina cpDNA. A phylogenetic analysis strongly supported the close phylogenetic affinity of S. latissima and Saccharina japonica. The complete cpDNA of S. latissima will provide valuable molecular data for further analysis of evolutionary and conservation genetic resources. Taylor & Francis 2020-10-05 /pmc/articles/PMC7782001/ /pubmed/33458211 http://dx.doi.org/10.1080/23802359.2020.1825999 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Fan, Xiao
Xie, Weifeng
Wang, Yitao
Xu, Dong
Zhang, Xiaowen
Ye, Naihao
The complete chloroplast genome of Saccharina latissima
title The complete chloroplast genome of Saccharina latissima
title_full The complete chloroplast genome of Saccharina latissima
title_fullStr The complete chloroplast genome of Saccharina latissima
title_full_unstemmed The complete chloroplast genome of Saccharina latissima
title_short The complete chloroplast genome of Saccharina latissima
title_sort complete chloroplast genome of saccharina latissima
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782001/
https://www.ncbi.nlm.nih.gov/pubmed/33458211
http://dx.doi.org/10.1080/23802359.2020.1825999
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