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The complete chloroplast genome sequence of Nepeta cataria L. (Labiatae)
Nepeta cataria L. is a common herbal medicine and it has been applied to the treatment of various diseases in China, especially common cold in children. In this study, we reported and characterized the complete chloroplast genome sequence of N. cataria L. The chloroplast genome was determined to be...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782012/ https://www.ncbi.nlm.nih.gov/pubmed/33458140 http://dx.doi.org/10.1080/23802359.2020.1813058 |
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author | Zhou, Hui Du, Linbo Fang, Zhihong |
author_facet | Zhou, Hui Du, Linbo Fang, Zhihong |
author_sort | Zhou, Hui |
collection | PubMed |
description | Nepeta cataria L. is a common herbal medicine and it has been applied to the treatment of various diseases in China, especially common cold in children. In this study, we reported and characterized the complete chloroplast genome sequence of N. cataria L. The chloroplast genome was determined to be 152,339 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 95,821 bp and 23,460 bp, respectively, which were separated by a pair of 16,529 bp inverted repeat (IR) regions. The genome is predicted to contain 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 37.85%. The complete plastome sequence of N. cataria L. will provide a useful resource for the conservation genetics of this species as well as for the phylogenetic studies for Schizonepeta tenuifolia Briq. A phylogenetic tree reconstructed by 19 chloroplast genomes reveals that N. cataria L. is mostly related to Callicarpa nudiflora, but forms an independent evolutionary branch. |
format | Online Article Text |
id | pubmed-7782012 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77820122021-01-14 The complete chloroplast genome sequence of Nepeta cataria L. (Labiatae) Zhou, Hui Du, Linbo Fang, Zhihong Mitochondrial DNA B Resour Mitogenome Announcement Nepeta cataria L. is a common herbal medicine and it has been applied to the treatment of various diseases in China, especially common cold in children. In this study, we reported and characterized the complete chloroplast genome sequence of N. cataria L. The chloroplast genome was determined to be 152,339 bp in length. It contained large single-copy (LSC) and small single-copy (SSC) regions of 95,821 bp and 23,460 bp, respectively, which were separated by a pair of 16,529 bp inverted repeat (IR) regions. The genome is predicted to contain 132 genes, including 87 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content of the genome is 37.85%. The complete plastome sequence of N. cataria L. will provide a useful resource for the conservation genetics of this species as well as for the phylogenetic studies for Schizonepeta tenuifolia Briq. A phylogenetic tree reconstructed by 19 chloroplast genomes reveals that N. cataria L. is mostly related to Callicarpa nudiflora, but forms an independent evolutionary branch. Taylor & Francis 2020-09-01 /pmc/articles/PMC7782012/ /pubmed/33458140 http://dx.doi.org/10.1080/23802359.2020.1813058 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhou, Hui Du, Linbo Fang, Zhihong The complete chloroplast genome sequence of Nepeta cataria L. (Labiatae) |
title | The complete chloroplast genome sequence of Nepeta cataria L. (Labiatae) |
title_full | The complete chloroplast genome sequence of Nepeta cataria L. (Labiatae) |
title_fullStr | The complete chloroplast genome sequence of Nepeta cataria L. (Labiatae) |
title_full_unstemmed | The complete chloroplast genome sequence of Nepeta cataria L. (Labiatae) |
title_short | The complete chloroplast genome sequence of Nepeta cataria L. (Labiatae) |
title_sort | complete chloroplast genome sequence of nepeta cataria l. (labiatae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782012/ https://www.ncbi.nlm.nih.gov/pubmed/33458140 http://dx.doi.org/10.1080/23802359.2020.1813058 |
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