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The complete chloroplast genome sequence of economical standard tea plant, Camellia sinensis L. cultivar Sangmok, in Korea
The complete chloroplast genome sequence of Camellia sinensis L. cultivar Sangmok was determined using high-throughput sequencing technology. We sequenced Sangmok chloroplast genome and performed comparative with 21 published other Camellia and species from different genus for phylogenetic analysis....
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782013/ https://www.ncbi.nlm.nih.gov/pubmed/33457968 http://dx.doi.org/10.1080/23802359.2020.1790311 |
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author | Lee, Dong-Jun Kim, Chang-Kug Lee, Tae-Ho Lee, So-Jin Moon, Doo-Gyung Kwon, Yong-Hee Cho, Jeong-Yong |
author_facet | Lee, Dong-Jun Kim, Chang-Kug Lee, Tae-Ho Lee, So-Jin Moon, Doo-Gyung Kwon, Yong-Hee Cho, Jeong-Yong |
author_sort | Lee, Dong-Jun |
collection | PubMed |
description | The complete chloroplast genome sequence of Camellia sinensis L. cultivar Sangmok was determined using high-throughput sequencing technology. We sequenced Sangmok chloroplast genome and performed comparative with 21 published other Camellia and species from different genus for phylogenetic analysis. Chloroplast genome was 153,044 bp in length, containing a pair of 24,627 bp inverted repeat (IR) regions, which were separated by small and large single-copy regions (SSC and LSC) of 19,155 and 64,665 bp, respectively. The chloroplast genome contained 97 genes (63 protein-coding genes, 29 tRNA genes, and 5 rRNA genes). The overall GC content of the chloroplast genome was 37.2%. The phylogenetic analysis among species in number of the genus Camellia provided that C. sinensis L. cultivar Sangmok is closely related to KJ806277 Camellia pubicosta. |
format | Online Article Text |
id | pubmed-7782013 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77820132021-01-14 The complete chloroplast genome sequence of economical standard tea plant, Camellia sinensis L. cultivar Sangmok, in Korea Lee, Dong-Jun Kim, Chang-Kug Lee, Tae-Ho Lee, So-Jin Moon, Doo-Gyung Kwon, Yong-Hee Cho, Jeong-Yong Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Camellia sinensis L. cultivar Sangmok was determined using high-throughput sequencing technology. We sequenced Sangmok chloroplast genome and performed comparative with 21 published other Camellia and species from different genus for phylogenetic analysis. Chloroplast genome was 153,044 bp in length, containing a pair of 24,627 bp inverted repeat (IR) regions, which were separated by small and large single-copy regions (SSC and LSC) of 19,155 and 64,665 bp, respectively. The chloroplast genome contained 97 genes (63 protein-coding genes, 29 tRNA genes, and 5 rRNA genes). The overall GC content of the chloroplast genome was 37.2%. The phylogenetic analysis among species in number of the genus Camellia provided that C. sinensis L. cultivar Sangmok is closely related to KJ806277 Camellia pubicosta. Taylor & Francis 2020-07-15 /pmc/articles/PMC7782013/ /pubmed/33457968 http://dx.doi.org/10.1080/23802359.2020.1790311 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Lee, Dong-Jun Kim, Chang-Kug Lee, Tae-Ho Lee, So-Jin Moon, Doo-Gyung Kwon, Yong-Hee Cho, Jeong-Yong The complete chloroplast genome sequence of economical standard tea plant, Camellia sinensis L. cultivar Sangmok, in Korea |
title | The complete chloroplast genome sequence of economical standard tea plant, Camellia sinensis L. cultivar Sangmok, in Korea |
title_full | The complete chloroplast genome sequence of economical standard tea plant, Camellia sinensis L. cultivar Sangmok, in Korea |
title_fullStr | The complete chloroplast genome sequence of economical standard tea plant, Camellia sinensis L. cultivar Sangmok, in Korea |
title_full_unstemmed | The complete chloroplast genome sequence of economical standard tea plant, Camellia sinensis L. cultivar Sangmok, in Korea |
title_short | The complete chloroplast genome sequence of economical standard tea plant, Camellia sinensis L. cultivar Sangmok, in Korea |
title_sort | complete chloroplast genome sequence of economical standard tea plant, camellia sinensis l. cultivar sangmok, in korea |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782013/ https://www.ncbi.nlm.nih.gov/pubmed/33457968 http://dx.doi.org/10.1080/23802359.2020.1790311 |
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