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Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae)
Favonigobius reichei, belongs to the family Gobiidae, which is widely distributed in estuarine and marine waters of the coasts of the Indian and the western Pacific Oceans. The entire mitochondrial genome of F. reichei is 16,415 base pairs (bp) in length and contained 13 protein-coding genes (PCGs),...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782015/ https://www.ncbi.nlm.nih.gov/pubmed/33457991 http://dx.doi.org/10.1080/23802359.2020.1791014 |
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author | He, Xiongbo Yi, Murong Yan, Yunrong Ju, Yu-Min |
author_facet | He, Xiongbo Yi, Murong Yan, Yunrong Ju, Yu-Min |
author_sort | He, Xiongbo |
collection | PubMed |
description | Favonigobius reichei, belongs to the family Gobiidae, which is widely distributed in estuarine and marine waters of the coasts of the Indian and the western Pacific Oceans. The entire mitochondrial genome of F. reichei is 16,415 base pairs (bp) in length and contained 13 protein-coding genes (PCGs), 2 ribosomal RNA (rRNA) genes, and 22 transfer RNA (tRNA) genes. The overall base composition is 27.71% A, 26.78% T, 28.02% C, and 17.49% G, showing AT-rich feature (54.49%). Phylogenetic analysis based on 13 PCGs shows the F. reichei has the closest evolutionary relationship with Myersina macrostoma. This work provides a valuable mitogenome resource for better understanding of the conservation genetics, environmental DNA, and population studies in the family Gobiidae. |
format | Online Article Text |
id | pubmed-7782015 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77820152021-01-14 Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae) He, Xiongbo Yi, Murong Yan, Yunrong Ju, Yu-Min Mitochondrial DNA B Resour Mitogenome Announcement Favonigobius reichei, belongs to the family Gobiidae, which is widely distributed in estuarine and marine waters of the coasts of the Indian and the western Pacific Oceans. The entire mitochondrial genome of F. reichei is 16,415 base pairs (bp) in length and contained 13 protein-coding genes (PCGs), 2 ribosomal RNA (rRNA) genes, and 22 transfer RNA (tRNA) genes. The overall base composition is 27.71% A, 26.78% T, 28.02% C, and 17.49% G, showing AT-rich feature (54.49%). Phylogenetic analysis based on 13 PCGs shows the F. reichei has the closest evolutionary relationship with Myersina macrostoma. This work provides a valuable mitogenome resource for better understanding of the conservation genetics, environmental DNA, and population studies in the family Gobiidae. Taylor & Francis 2020-07-20 /pmc/articles/PMC7782015/ /pubmed/33457991 http://dx.doi.org/10.1080/23802359.2020.1791014 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement He, Xiongbo Yi, Murong Yan, Yunrong Ju, Yu-Min Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae) |
title | Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae) |
title_full | Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae) |
title_fullStr | Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae) |
title_full_unstemmed | Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae) |
title_short | Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae) |
title_sort | characterization of the mitochondrial genome of favonigobius reichei (perciformes, gobiidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782015/ https://www.ncbi.nlm.nih.gov/pubmed/33457991 http://dx.doi.org/10.1080/23802359.2020.1791014 |
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