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Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae)

Favonigobius reichei, belongs to the family Gobiidae, which is widely distributed in estuarine and marine waters of the coasts of the Indian and the western Pacific Oceans. The entire mitochondrial genome of F. reichei is 16,415 base pairs (bp) in length and contained 13 protein-coding genes (PCGs),...

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Autores principales: He, Xiongbo, Yi, Murong, Yan, Yunrong, Ju, Yu-Min
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782015/
https://www.ncbi.nlm.nih.gov/pubmed/33457991
http://dx.doi.org/10.1080/23802359.2020.1791014
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author He, Xiongbo
Yi, Murong
Yan, Yunrong
Ju, Yu-Min
author_facet He, Xiongbo
Yi, Murong
Yan, Yunrong
Ju, Yu-Min
author_sort He, Xiongbo
collection PubMed
description Favonigobius reichei, belongs to the family Gobiidae, which is widely distributed in estuarine and marine waters of the coasts of the Indian and the western Pacific Oceans. The entire mitochondrial genome of F. reichei is 16,415 base pairs (bp) in length and contained 13 protein-coding genes (PCGs), 2 ribosomal RNA (rRNA) genes, and 22 transfer RNA (tRNA) genes. The overall base composition is 27.71% A, 26.78% T, 28.02% C, and 17.49% G, showing AT-rich feature (54.49%). Phylogenetic analysis based on 13 PCGs shows the F. reichei has the closest evolutionary relationship with Myersina macrostoma. This work provides a valuable mitogenome resource for better understanding of the conservation genetics, environmental DNA, and population studies in the family Gobiidae.
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spelling pubmed-77820152021-01-14 Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae) He, Xiongbo Yi, Murong Yan, Yunrong Ju, Yu-Min Mitochondrial DNA B Resour Mitogenome Announcement Favonigobius reichei, belongs to the family Gobiidae, which is widely distributed in estuarine and marine waters of the coasts of the Indian and the western Pacific Oceans. The entire mitochondrial genome of F. reichei is 16,415 base pairs (bp) in length and contained 13 protein-coding genes (PCGs), 2 ribosomal RNA (rRNA) genes, and 22 transfer RNA (tRNA) genes. The overall base composition is 27.71% A, 26.78% T, 28.02% C, and 17.49% G, showing AT-rich feature (54.49%). Phylogenetic analysis based on 13 PCGs shows the F. reichei has the closest evolutionary relationship with Myersina macrostoma. This work provides a valuable mitogenome resource for better understanding of the conservation genetics, environmental DNA, and population studies in the family Gobiidae. Taylor & Francis 2020-07-20 /pmc/articles/PMC7782015/ /pubmed/33457991 http://dx.doi.org/10.1080/23802359.2020.1791014 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
He, Xiongbo
Yi, Murong
Yan, Yunrong
Ju, Yu-Min
Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae)
title Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae)
title_full Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae)
title_fullStr Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae)
title_full_unstemmed Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae)
title_short Characterization of the mitochondrial genome of Favonigobius reichei (Perciformes, Gobiidae)
title_sort characterization of the mitochondrial genome of favonigobius reichei (perciformes, gobiidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782015/
https://www.ncbi.nlm.nih.gov/pubmed/33457991
http://dx.doi.org/10.1080/23802359.2020.1791014
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AT yimurong characterizationofthemitochondrialgenomeoffavonigobiusreicheiperciformesgobiidae
AT yanyunrong characterizationofthemitochondrialgenomeoffavonigobiusreicheiperciformesgobiidae
AT juyumin characterizationofthemitochondrialgenomeoffavonigobiusreicheiperciformesgobiidae