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Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae)
The complete mitochondrial genome (mitogenome) of Scythris sinensis Felder & Rogenhofer, 1775 (Lepidoptera: Scythrididae) was 15,216 bp with a typical set of genes (13 protein-coding genes [PCGs], 2 rRNA genes, and 22 tRNA genes) and one non-coding region, with an arrangement identical to that o...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782017/ https://www.ncbi.nlm.nih.gov/pubmed/33457848 http://dx.doi.org/10.1080/23802359.2020.1780990 |
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author | Park, Jeong Sun Kim, Min Jee Kim, Sung-Soo Kim, Iksoo |
author_facet | Park, Jeong Sun Kim, Min Jee Kim, Sung-Soo Kim, Iksoo |
author_sort | Park, Jeong Sun |
collection | PubMed |
description | The complete mitochondrial genome (mitogenome) of Scythris sinensis Felder & Rogenhofer, 1775 (Lepidoptera: Scythrididae) was 15,216 bp with a typical set of genes (13 protein-coding genes [PCGs], 2 rRNA genes, and 22 tRNA genes) and one non-coding region, with an arrangement identical to that observed in most lepidopteran genomes. Twelve PCGs had the typical ATN start codon, whereas COI had the atypical CGA codon that is frequently found in the start region of the lepidopteran COI. The 271-bp long A + T-rich region was the shortest among sequenced Gelechioidea, which ranged from 290 – 375 bp. Phylogenetic analyses with concatenated sequences of the 13 PCGs, two RNA genes, and 22 tRNA genes using the Bayesian inference (BI) method, placed S. sinensis in the Scythrididae, as a sister to the family Stathmopodidae. The nodal support for this sister relationship was the highest at Bayesian posterior probabilities = 1. |
format | Online Article Text |
id | pubmed-7782017 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77820172021-01-14 Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae) Park, Jeong Sun Kim, Min Jee Kim, Sung-Soo Kim, Iksoo Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome (mitogenome) of Scythris sinensis Felder & Rogenhofer, 1775 (Lepidoptera: Scythrididae) was 15,216 bp with a typical set of genes (13 protein-coding genes [PCGs], 2 rRNA genes, and 22 tRNA genes) and one non-coding region, with an arrangement identical to that observed in most lepidopteran genomes. Twelve PCGs had the typical ATN start codon, whereas COI had the atypical CGA codon that is frequently found in the start region of the lepidopteran COI. The 271-bp long A + T-rich region was the shortest among sequenced Gelechioidea, which ranged from 290 – 375 bp. Phylogenetic analyses with concatenated sequences of the 13 PCGs, two RNA genes, and 22 tRNA genes using the Bayesian inference (BI) method, placed S. sinensis in the Scythrididae, as a sister to the family Stathmopodidae. The nodal support for this sister relationship was the highest at Bayesian posterior probabilities = 1. Taylor & Francis 2020-06-17 /pmc/articles/PMC7782017/ /pubmed/33457848 http://dx.doi.org/10.1080/23802359.2020.1780990 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Park, Jeong Sun Kim, Min Jee Kim, Sung-Soo Kim, Iksoo Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae) |
title | Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae) |
title_full | Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae) |
title_fullStr | Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae) |
title_full_unstemmed | Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae) |
title_short | Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae) |
title_sort | complete mitochondrial genome of scythris sinensis (lepidoptera: scythrididae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782017/ https://www.ncbi.nlm.nih.gov/pubmed/33457848 http://dx.doi.org/10.1080/23802359.2020.1780990 |
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