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Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae)

The complete mitochondrial genome (mitogenome) of Scythris sinensis Felder & Rogenhofer, 1775 (Lepidoptera: Scythrididae) was 15,216 bp with a typical set of genes (13 protein-coding genes [PCGs], 2 rRNA genes, and 22 tRNA genes) and one non-coding region, with an arrangement identical to that o...

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Autores principales: Park, Jeong Sun, Kim, Min Jee, Kim, Sung-Soo, Kim, Iksoo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782017/
https://www.ncbi.nlm.nih.gov/pubmed/33457848
http://dx.doi.org/10.1080/23802359.2020.1780990
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author Park, Jeong Sun
Kim, Min Jee
Kim, Sung-Soo
Kim, Iksoo
author_facet Park, Jeong Sun
Kim, Min Jee
Kim, Sung-Soo
Kim, Iksoo
author_sort Park, Jeong Sun
collection PubMed
description The complete mitochondrial genome (mitogenome) of Scythris sinensis Felder & Rogenhofer, 1775 (Lepidoptera: Scythrididae) was 15,216 bp with a typical set of genes (13 protein-coding genes [PCGs], 2 rRNA genes, and 22 tRNA genes) and one non-coding region, with an arrangement identical to that observed in most lepidopteran genomes. Twelve PCGs had the typical ATN start codon, whereas COI had the atypical CGA codon that is frequently found in the start region of the lepidopteran COI. The 271-bp long A + T-rich region was the shortest among sequenced Gelechioidea, which ranged from 290 – 375 bp. Phylogenetic analyses with concatenated sequences of the 13 PCGs, two RNA genes, and 22 tRNA genes using the Bayesian inference (BI) method, placed S. sinensis in the Scythrididae, as a sister to the family Stathmopodidae. The nodal support for this sister relationship was the highest at Bayesian posterior probabilities = 1.
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spelling pubmed-77820172021-01-14 Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae) Park, Jeong Sun Kim, Min Jee Kim, Sung-Soo Kim, Iksoo Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome (mitogenome) of Scythris sinensis Felder & Rogenhofer, 1775 (Lepidoptera: Scythrididae) was 15,216 bp with a typical set of genes (13 protein-coding genes [PCGs], 2 rRNA genes, and 22 tRNA genes) and one non-coding region, with an arrangement identical to that observed in most lepidopteran genomes. Twelve PCGs had the typical ATN start codon, whereas COI had the atypical CGA codon that is frequently found in the start region of the lepidopteran COI. The 271-bp long A + T-rich region was the shortest among sequenced Gelechioidea, which ranged from 290 – 375 bp. Phylogenetic analyses with concatenated sequences of the 13 PCGs, two RNA genes, and 22 tRNA genes using the Bayesian inference (BI) method, placed S. sinensis in the Scythrididae, as a sister to the family Stathmopodidae. The nodal support for this sister relationship was the highest at Bayesian posterior probabilities = 1. Taylor & Francis 2020-06-17 /pmc/articles/PMC7782017/ /pubmed/33457848 http://dx.doi.org/10.1080/23802359.2020.1780990 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Park, Jeong Sun
Kim, Min Jee
Kim, Sung-Soo
Kim, Iksoo
Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae)
title Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae)
title_full Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae)
title_fullStr Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae)
title_full_unstemmed Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae)
title_short Complete mitochondrial genome of Scythris sinensis (Lepidoptera: Scythrididae)
title_sort complete mitochondrial genome of scythris sinensis (lepidoptera: scythrididae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782017/
https://www.ncbi.nlm.nih.gov/pubmed/33457848
http://dx.doi.org/10.1080/23802359.2020.1780990
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