The complete chloroplast genome sequence of Vitis champinii

Vitis champinii is a grapevine rootstock species and widely used in vineyards and in rootstock breeding programs for regions with high nematode populations or saline soils. Here, the complete chloroplast genome of V. champinii was reported. The length of the chloroplast genome was 160,657 bp with a...

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Autores principales: Xiang, Jiang, Wei, Lingzhu, Cheng, Jianhui, Li, Mingshan, Cui, Pengfei, Wu, Jiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782025/
https://www.ncbi.nlm.nih.gov/pubmed/33457976
http://dx.doi.org/10.1080/23802359.2020.1791005
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author Xiang, Jiang
Wei, Lingzhu
Cheng, Jianhui
Li, Mingshan
Cui, Pengfei
Wu, Jiang
author_facet Xiang, Jiang
Wei, Lingzhu
Cheng, Jianhui
Li, Mingshan
Cui, Pengfei
Wu, Jiang
author_sort Xiang, Jiang
collection PubMed
description Vitis champinii is a grapevine rootstock species and widely used in vineyards and in rootstock breeding programs for regions with high nematode populations or saline soils. Here, the complete chloroplast genome of V. champinii was reported. The length of the chloroplast genome was 160,657 bp with a large single copy region of 89,217 bp, a small single copy region of 19,504 bp and two separated inverted regions of 51,936 bp, respectively. In total, 130 unique genes were identified of this genome, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis indicates that V. champinii is closely related to Vitis acerifolia.
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spelling pubmed-77820252021-01-14 The complete chloroplast genome sequence of Vitis champinii Xiang, Jiang Wei, Lingzhu Cheng, Jianhui Li, Mingshan Cui, Pengfei Wu, Jiang Mitochondrial DNA B Resour Mitogenome Announcement Vitis champinii is a grapevine rootstock species and widely used in vineyards and in rootstock breeding programs for regions with high nematode populations or saline soils. Here, the complete chloroplast genome of V. champinii was reported. The length of the chloroplast genome was 160,657 bp with a large single copy region of 89,217 bp, a small single copy region of 19,504 bp and two separated inverted regions of 51,936 bp, respectively. In total, 130 unique genes were identified of this genome, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis indicates that V. champinii is closely related to Vitis acerifolia. Taylor & Francis 2020-07-15 /pmc/articles/PMC7782025/ /pubmed/33457976 http://dx.doi.org/10.1080/23802359.2020.1791005 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xiang, Jiang
Wei, Lingzhu
Cheng, Jianhui
Li, Mingshan
Cui, Pengfei
Wu, Jiang
The complete chloroplast genome sequence of Vitis champinii
title The complete chloroplast genome sequence of Vitis champinii
title_full The complete chloroplast genome sequence of Vitis champinii
title_fullStr The complete chloroplast genome sequence of Vitis champinii
title_full_unstemmed The complete chloroplast genome sequence of Vitis champinii
title_short The complete chloroplast genome sequence of Vitis champinii
title_sort complete chloroplast genome sequence of vitis champinii
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782025/
https://www.ncbi.nlm.nih.gov/pubmed/33457976
http://dx.doi.org/10.1080/23802359.2020.1791005
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