The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis

Camellia gauchowensis is an economic woody edible oil tree species with high yield per unit area and high ornamental value, which is commonly cultivated in the south of China. The complete chloroplast (cp) genome of C. gauchowensis was assembled and annotated based on the Illumina pair-end sequencin...

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Autores principales: Zhang, Yuanlan, Wang, Guibin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782028/
https://www.ncbi.nlm.nih.gov/pubmed/33457767
http://dx.doi.org/10.1080/23802359.2020.1772694
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author Zhang, Yuanlan
Wang, Guibin
author_facet Zhang, Yuanlan
Wang, Guibin
author_sort Zhang, Yuanlan
collection PubMed
description Camellia gauchowensis is an economic woody edible oil tree species with high yield per unit area and high ornamental value, which is commonly cultivated in the south of China. The complete chloroplast (cp) genome of C. gauchowensis was assembled and annotated based on the Illumina pair-end sequencing. The whole cp genome of C. gauchowensis is 157,004 bp in size and comprises of a large single-copy (LSC) region of 86,657 bp and a small single-copy (SSC) region of 18,297 bp separated by a pair of inverted repeat (IR) regions of 26,025 bp each. It encodes a total of 129 genes, including 81 protein-coding genes, 5 ribosomal RNA genes, and 43 transfer RNA genes. The neighbor-joining phylogenetic analysis shows that C. gauchowensis is evolutionarily closest to C. cuspidata.
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spelling pubmed-77820282021-01-14 The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis Zhang, Yuanlan Wang, Guibin Mitochondrial DNA B Resour Mitogenome Announcement Camellia gauchowensis is an economic woody edible oil tree species with high yield per unit area and high ornamental value, which is commonly cultivated in the south of China. The complete chloroplast (cp) genome of C. gauchowensis was assembled and annotated based on the Illumina pair-end sequencing. The whole cp genome of C. gauchowensis is 157,004 bp in size and comprises of a large single-copy (LSC) region of 86,657 bp and a small single-copy (SSC) region of 18,297 bp separated by a pair of inverted repeat (IR) regions of 26,025 bp each. It encodes a total of 129 genes, including 81 protein-coding genes, 5 ribosomal RNA genes, and 43 transfer RNA genes. The neighbor-joining phylogenetic analysis shows that C. gauchowensis is evolutionarily closest to C. cuspidata. Taylor & Francis 2020-06-02 /pmc/articles/PMC7782028/ /pubmed/33457767 http://dx.doi.org/10.1080/23802359.2020.1772694 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Yuanlan
Wang, Guibin
The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
title The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
title_full The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
title_fullStr The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
title_full_unstemmed The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
title_short The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
title_sort complete chloroplast genome of camellia gauchowensis and its phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782028/
https://www.ncbi.nlm.nih.gov/pubmed/33457767
http://dx.doi.org/10.1080/23802359.2020.1772694
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