The complete chloroplast genome of Typhonium giganteum (Araceae)

The complete chloroplast genome sequence of Typhonium giganteum, a species of the Araceae family, was characterized from the de novo assembly of HiSeq (Illumina Co.) paired-end sequencing data. The chloroplast genome of T. giganteum was 165,289 bp in length, with a large single-copy (LSC) region of...

Descripción completa

Detalles Bibliográficos
Autores principales: Kim, Jinhyuk, Lee, Junki, Choi, Sunseong, Um, Sanghee, Kim, Hyojin, Chun, Hyang Sook, Nah, Gyoungju
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782031/
https://www.ncbi.nlm.nih.gov/pubmed/33458030
http://dx.doi.org/10.1080/23802359.2020.1797571
_version_ 1783631805976412160
author Kim, Jinhyuk
Lee, Junki
Choi, Sunseong
Um, Sanghee
Kim, Hyojin
Chun, Hyang Sook
Nah, Gyoungju
author_facet Kim, Jinhyuk
Lee, Junki
Choi, Sunseong
Um, Sanghee
Kim, Hyojin
Chun, Hyang Sook
Nah, Gyoungju
author_sort Kim, Jinhyuk
collection PubMed
description The complete chloroplast genome sequence of Typhonium giganteum, a species of the Araceae family, was characterized from the de novo assembly of HiSeq (Illumina Co.) paired-end sequencing data. The chloroplast genome of T. giganteum was 165,289 bp in length, with a large single-copy (LSC) region of 91,747 bp, a small single-copy (SSC) region of 22,550 bp, and a pair of identical inverted repeat regions (IRs) of 25,496 bp. The genome contained a total of 132 genes, including 86 protein-coding genes, 38 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. The phylogenetic analysis of T. giganteum with 12 related species revealed the closest taxonomical relationship with Pinellia pedatisecta in the Araceae.
format Online
Article
Text
id pubmed-7782031
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77820312021-01-14 The complete chloroplast genome of Typhonium giganteum (Araceae) Kim, Jinhyuk Lee, Junki Choi, Sunseong Um, Sanghee Kim, Hyojin Chun, Hyang Sook Nah, Gyoungju Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome sequence of Typhonium giganteum, a species of the Araceae family, was characterized from the de novo assembly of HiSeq (Illumina Co.) paired-end sequencing data. The chloroplast genome of T. giganteum was 165,289 bp in length, with a large single-copy (LSC) region of 91,747 bp, a small single-copy (SSC) region of 22,550 bp, and a pair of identical inverted repeat regions (IRs) of 25,496 bp. The genome contained a total of 132 genes, including 86 protein-coding genes, 38 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. The phylogenetic analysis of T. giganteum with 12 related species revealed the closest taxonomical relationship with Pinellia pedatisecta in the Araceae. Taylor & Francis 2020-07-25 /pmc/articles/PMC7782031/ /pubmed/33458030 http://dx.doi.org/10.1080/23802359.2020.1797571 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Kim, Jinhyuk
Lee, Junki
Choi, Sunseong
Um, Sanghee
Kim, Hyojin
Chun, Hyang Sook
Nah, Gyoungju
The complete chloroplast genome of Typhonium giganteum (Araceae)
title The complete chloroplast genome of Typhonium giganteum (Araceae)
title_full The complete chloroplast genome of Typhonium giganteum (Araceae)
title_fullStr The complete chloroplast genome of Typhonium giganteum (Araceae)
title_full_unstemmed The complete chloroplast genome of Typhonium giganteum (Araceae)
title_short The complete chloroplast genome of Typhonium giganteum (Araceae)
title_sort complete chloroplast genome of typhonium giganteum (araceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782031/
https://www.ncbi.nlm.nih.gov/pubmed/33458030
http://dx.doi.org/10.1080/23802359.2020.1797571
work_keys_str_mv AT kimjinhyuk thecompletechloroplastgenomeoftyphoniumgiganteumaraceae
AT leejunki thecompletechloroplastgenomeoftyphoniumgiganteumaraceae
AT choisunseong thecompletechloroplastgenomeoftyphoniumgiganteumaraceae
AT umsanghee thecompletechloroplastgenomeoftyphoniumgiganteumaraceae
AT kimhyojin thecompletechloroplastgenomeoftyphoniumgiganteumaraceae
AT chunhyangsook thecompletechloroplastgenomeoftyphoniumgiganteumaraceae
AT nahgyoungju thecompletechloroplastgenomeoftyphoniumgiganteumaraceae
AT kimjinhyuk completechloroplastgenomeoftyphoniumgiganteumaraceae
AT leejunki completechloroplastgenomeoftyphoniumgiganteumaraceae
AT choisunseong completechloroplastgenomeoftyphoniumgiganteumaraceae
AT umsanghee completechloroplastgenomeoftyphoniumgiganteumaraceae
AT kimhyojin completechloroplastgenomeoftyphoniumgiganteumaraceae
AT chunhyangsook completechloroplastgenomeoftyphoniumgiganteumaraceae
AT nahgyoungju completechloroplastgenomeoftyphoniumgiganteumaraceae

Ejemplares similares