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The complete chloroplast genome sequence of Garcinia oblongifolia (Clusiaceae)
Garcinia oblongifolia Champ. ex Benth is rich in bioactive molecules with immense remedial qualities and has pharmaceutical potentials. In this study, we reported the complete chloroplast genome (cpDNA) of G. oblongifolia, which is 156,577 bp in length, including a large single copy region (LSC) of...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782034/ https://www.ncbi.nlm.nih.gov/pubmed/33458113 http://dx.doi.org/10.1080/23802359.2020.1810162 |
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author | Ma, Xiang Chen, Weifang Tang, Liang |
author_facet | Ma, Xiang Chen, Weifang Tang, Liang |
author_sort | Ma, Xiang |
collection | PubMed |
description | Garcinia oblongifolia Champ. ex Benth is rich in bioactive molecules with immense remedial qualities and has pharmaceutical potentials. In this study, we reported the complete chloroplast genome (cpDNA) of G. oblongifolia, which is 156,577 bp in length, including a large single copy region (LSC) of 85,393 bp, a small single copy region (SSC) of 17,064 bp, and a pair of inverted repeats (IR) regions of 27,060 bp inserted between LSC and SSC. 129 genes are encoded, including 83 protein-encoding genes, 8 ribosomal RNA genes, and 36 transfer RNA genes. The overall GC content of the chloroplast genome is 36.2%, wherein the corresponding values in the LSC, SSC and IR regions are 33.6%, 30.3%, and 42.2%, respectively. Phylogenetic analysis showed that G. oblongifolia is sister to G. gummi-gutta with strong bootstrap support. |
format | Online Article Text |
id | pubmed-7782034 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77820342021-01-14 The complete chloroplast genome sequence of Garcinia oblongifolia (Clusiaceae) Ma, Xiang Chen, Weifang Tang, Liang Mitochondrial DNA B Resour Mitogenome Announcement Garcinia oblongifolia Champ. ex Benth is rich in bioactive molecules with immense remedial qualities and has pharmaceutical potentials. In this study, we reported the complete chloroplast genome (cpDNA) of G. oblongifolia, which is 156,577 bp in length, including a large single copy region (LSC) of 85,393 bp, a small single copy region (SSC) of 17,064 bp, and a pair of inverted repeats (IR) regions of 27,060 bp inserted between LSC and SSC. 129 genes are encoded, including 83 protein-encoding genes, 8 ribosomal RNA genes, and 36 transfer RNA genes. The overall GC content of the chloroplast genome is 36.2%, wherein the corresponding values in the LSC, SSC and IR regions are 33.6%, 30.3%, and 42.2%, respectively. Phylogenetic analysis showed that G. oblongifolia is sister to G. gummi-gutta with strong bootstrap support. Taylor & Francis 2020-08-25 /pmc/articles/PMC7782034/ /pubmed/33458113 http://dx.doi.org/10.1080/23802359.2020.1810162 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Ma, Xiang Chen, Weifang Tang, Liang The complete chloroplast genome sequence of Garcinia oblongifolia (Clusiaceae) |
title | The complete chloroplast genome sequence of Garcinia oblongifolia (Clusiaceae) |
title_full | The complete chloroplast genome sequence of Garcinia oblongifolia (Clusiaceae) |
title_fullStr | The complete chloroplast genome sequence of Garcinia oblongifolia (Clusiaceae) |
title_full_unstemmed | The complete chloroplast genome sequence of Garcinia oblongifolia (Clusiaceae) |
title_short | The complete chloroplast genome sequence of Garcinia oblongifolia (Clusiaceae) |
title_sort | complete chloroplast genome sequence of garcinia oblongifolia (clusiaceae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782034/ https://www.ncbi.nlm.nih.gov/pubmed/33458113 http://dx.doi.org/10.1080/23802359.2020.1810162 |
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