The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing

In this study, we obtained the complete mitochondrial genome of Hapalogenys analis using whole genome sequencing. With the exception for control region, this mitochondrial genome, consisting of 16,355 base pairs (bp), contains 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), and 21 transfer...

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Autores principales: Zheng, Yunya, Feng, Linxiao, Liu, Haoyu, Song, Riyu, Xu, Shengyong, Shi, Huilai, Gao, Tianxiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
MitoGenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782058/
https://www.ncbi.nlm.nih.gov/pubmed/33457955
http://dx.doi.org/10.1080/23802359.2020.1788463
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author Zheng, Yunya
Feng, Linxiao
Liu, Haoyu
Song, Riyu
Xu, Shengyong
Shi, Huilai
Gao, Tianxiang
author_facet Zheng, Yunya
Feng, Linxiao
Liu, Haoyu
Song, Riyu
Xu, Shengyong
Shi, Huilai
Gao, Tianxiang
author_sort Zheng, Yunya
collection PubMed
description In this study, we obtained the complete mitochondrial genome of Hapalogenys analis using whole genome sequencing. With the exception for control region, this mitochondrial genome, consisting of 16,355 base pairs (bp), contains 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), and 21 transfer RNAs (tRNAs). This mitochondrial genome also lacks a tRNA-Pro gene after tRNA-Thr gene. The overall base composition shows 25.45% of T, 29.73% of C, 28.68% of A and 16.14% of G, with a slight A + T rich feature (54.13%). Sanger sequencing is needed to confirm the accuracy of control region, as well as the lack of tRNA-Pro gene. The mitogenome data provides useful genetic markers for the studies on the molecular identification, population genetics, phylogenetic analysis and conservation genetics.
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spelling pubmed-77820582021-01-14 The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing Zheng, Yunya Feng, Linxiao Liu, Haoyu Song, Riyu Xu, Shengyong Shi, Huilai Gao, Tianxiang Mitochondrial DNA B Resour MitoGenome Announcement In this study, we obtained the complete mitochondrial genome of Hapalogenys analis using whole genome sequencing. With the exception for control region, this mitochondrial genome, consisting of 16,355 base pairs (bp), contains 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), and 21 transfer RNAs (tRNAs). This mitochondrial genome also lacks a tRNA-Pro gene after tRNA-Thr gene. The overall base composition shows 25.45% of T, 29.73% of C, 28.68% of A and 16.14% of G, with a slight A + T rich feature (54.13%). Sanger sequencing is needed to confirm the accuracy of control region, as well as the lack of tRNA-Pro gene. The mitogenome data provides useful genetic markers for the studies on the molecular identification, population genetics, phylogenetic analysis and conservation genetics. Taylor & Francis 2020-07-14 /pmc/articles/PMC7782058/ /pubmed/33457955 http://dx.doi.org/10.1080/23802359.2020.1788463 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle MitoGenome Announcement
Zheng, Yunya
Feng, Linxiao
Liu, Haoyu
Song, Riyu
Xu, Shengyong
Shi, Huilai
Gao, Tianxiang
The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing
title The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing
title_full The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing
title_fullStr The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing
title_full_unstemmed The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing
title_short The complete mitochondrial genome of Hapalogenys analis (Perciformes, Haemulidea) except for control region, obtained by whole genome sequencing
title_sort complete mitochondrial genome of hapalogenys analis (perciformes, haemulidea) except for control region, obtained by whole genome sequencing
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782058/
https://www.ncbi.nlm.nih.gov/pubmed/33457955
http://dx.doi.org/10.1080/23802359.2020.1788463
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