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The whole mitochondrial genome of Sarcophaga kanoi (Diptera: Sarcophagidae)

Sarcophaga kanoi Park, 1962, a widely distributed flesh fly in Southeast Asia, is important in forensic entomology. Notably, its mitochondrial genome could provide the unique and accurate molecular information in species identification which facilitate forensic practices in estimation of postmortem...

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Autores principales: She, Yueting, Wang, Chaojun, Wang, Weifeng, Zeng, Qin, Mao, Wei, Gu, Xiaoping, Yuan, Hao, Pan, Xiaoling, Wang, Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782063/
https://www.ncbi.nlm.nih.gov/pubmed/33457892
http://dx.doi.org/10.1080/23802359.2020.1787272
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author She, Yueting
Wang, Chaojun
Wang, Weifeng
Zeng, Qin
Mao, Wei
Gu, Xiaoping
Yuan, Hao
Pan, Xiaoling
Wang, Yong
author_facet She, Yueting
Wang, Chaojun
Wang, Weifeng
Zeng, Qin
Mao, Wei
Gu, Xiaoping
Yuan, Hao
Pan, Xiaoling
Wang, Yong
author_sort She, Yueting
collection PubMed
description Sarcophaga kanoi Park, 1962, a widely distributed flesh fly in Southeast Asia, is important in forensic entomology. Notably, its mitochondrial genome could provide the unique and accurate molecular information in species identification which facilitate forensic practices in estimation of postmortem interval especially in putrefied cadaver cases. Thus, we sequenced and characterized the whole mitochondrial genome (mitogenome) of S. kanoi for the first time, which was collected from Southern China in this study. The 15,319 bp mitogenome contained 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), 2 ribosomal RNA genes (rRNA), and a putative control region. The total nucleotide composition of this circular genome was 39.7% for A, 9.3% for G, 14.2% for C, and 36.8% for T. To better understand the genetic relationship, the phylogenetic analysis was constructed according to the 13 PCGs sequence of S. kanoi and other 11 species. The phylogenetic tree showed that the S. kanoi was placed in a sub-clade with S. similis. Our study updated the new genetic information for dipteran mitogenomes, which could broaden the background knowledge for forensic entomology, molecular genetics and developmental biology. It has the potential application on the species identification using genetic markers.
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spelling pubmed-77820632021-01-14 The whole mitochondrial genome of Sarcophaga kanoi (Diptera: Sarcophagidae) She, Yueting Wang, Chaojun Wang, Weifeng Zeng, Qin Mao, Wei Gu, Xiaoping Yuan, Hao Pan, Xiaoling Wang, Yong Mitochondrial DNA B Resour Mitogenome Announcement Sarcophaga kanoi Park, 1962, a widely distributed flesh fly in Southeast Asia, is important in forensic entomology. Notably, its mitochondrial genome could provide the unique and accurate molecular information in species identification which facilitate forensic practices in estimation of postmortem interval especially in putrefied cadaver cases. Thus, we sequenced and characterized the whole mitochondrial genome (mitogenome) of S. kanoi for the first time, which was collected from Southern China in this study. The 15,319 bp mitogenome contained 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), 2 ribosomal RNA genes (rRNA), and a putative control region. The total nucleotide composition of this circular genome was 39.7% for A, 9.3% for G, 14.2% for C, and 36.8% for T. To better understand the genetic relationship, the phylogenetic analysis was constructed according to the 13 PCGs sequence of S. kanoi and other 11 species. The phylogenetic tree showed that the S. kanoi was placed in a sub-clade with S. similis. Our study updated the new genetic information for dipteran mitogenomes, which could broaden the background knowledge for forensic entomology, molecular genetics and developmental biology. It has the potential application on the species identification using genetic markers. Taylor & Francis 2020-07-02 /pmc/articles/PMC7782063/ /pubmed/33457892 http://dx.doi.org/10.1080/23802359.2020.1787272 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
She, Yueting
Wang, Chaojun
Wang, Weifeng
Zeng, Qin
Mao, Wei
Gu, Xiaoping
Yuan, Hao
Pan, Xiaoling
Wang, Yong
The whole mitochondrial genome of Sarcophaga kanoi (Diptera: Sarcophagidae)
title The whole mitochondrial genome of Sarcophaga kanoi (Diptera: Sarcophagidae)
title_full The whole mitochondrial genome of Sarcophaga kanoi (Diptera: Sarcophagidae)
title_fullStr The whole mitochondrial genome of Sarcophaga kanoi (Diptera: Sarcophagidae)
title_full_unstemmed The whole mitochondrial genome of Sarcophaga kanoi (Diptera: Sarcophagidae)
title_short The whole mitochondrial genome of Sarcophaga kanoi (Diptera: Sarcophagidae)
title_sort whole mitochondrial genome of sarcophaga kanoi (diptera: sarcophagidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782063/
https://www.ncbi.nlm.nih.gov/pubmed/33457892
http://dx.doi.org/10.1080/23802359.2020.1787272
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