The complete chloroplast genome sequence of the Canna edulis Ker Gawl. (Cannaceae)

Canna edulis Ker Gawl. is an essential traditional tuber crop used for fresh consumption and to isolate starch in some tropical and semitropical regions. The complete chloroplast genome sequence of C. edulis has been determined in this study. The total genome size is 164,650 bp in length and contain...

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Autores principales: Zhu, Qianglong, Cai, Lijuan, Li, Huiying, Zhang, Yu, Su, Wenzhen, Zhou, Qinghong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782134/
https://www.ncbi.nlm.nih.gov/pubmed/33457814
http://dx.doi.org/10.1080/23802359.2020.1775512
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author Zhu, Qianglong
Cai, Lijuan
Li, Huiying
Zhang, Yu
Su, Wenzhen
Zhou, Qinghong
author_facet Zhu, Qianglong
Cai, Lijuan
Li, Huiying
Zhang, Yu
Su, Wenzhen
Zhou, Qinghong
author_sort Zhu, Qianglong
collection PubMed
description Canna edulis Ker Gawl. is an essential traditional tuber crop used for fresh consumption and to isolate starch in some tropical and semitropical regions. The complete chloroplast genome sequence of C. edulis has been determined in this study. The total genome size is 164,650 bp in length and contains a pair of inverted repeats (IRs) of 27,278 bp, which were separated by large single-copy (LSC) and small single-copy (SSC) of 91,421 bp and 18,673 bp, respectively. A total of 131 genes were predicted including 86 protein-coding genes, 8 rRNA genes and 37 tRNA genes. Further, maximum-likelihood phylogenetic analysis revealed that C. edulis belongs to Cannaceae in Zingiberales. The chloroplast genome of C. edulis is first complete genome sequence in Cannaceae and would play a significant role in the development of molecular markers in plant phylogenetic and population genetic studies.
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spelling pubmed-77821342021-01-14 The complete chloroplast genome sequence of the Canna edulis Ker Gawl. (Cannaceae) Zhu, Qianglong Cai, Lijuan Li, Huiying Zhang, Yu Su, Wenzhen Zhou, Qinghong Mitochondrial DNA B Resour Mitogenome Announcement Canna edulis Ker Gawl. is an essential traditional tuber crop used for fresh consumption and to isolate starch in some tropical and semitropical regions. The complete chloroplast genome sequence of C. edulis has been determined in this study. The total genome size is 164,650 bp in length and contains a pair of inverted repeats (IRs) of 27,278 bp, which were separated by large single-copy (LSC) and small single-copy (SSC) of 91,421 bp and 18,673 bp, respectively. A total of 131 genes were predicted including 86 protein-coding genes, 8 rRNA genes and 37 tRNA genes. Further, maximum-likelihood phylogenetic analysis revealed that C. edulis belongs to Cannaceae in Zingiberales. The chloroplast genome of C. edulis is first complete genome sequence in Cannaceae and would play a significant role in the development of molecular markers in plant phylogenetic and population genetic studies. Taylor & Francis 2020-06-11 /pmc/articles/PMC7782134/ /pubmed/33457814 http://dx.doi.org/10.1080/23802359.2020.1775512 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhu, Qianglong
Cai, Lijuan
Li, Huiying
Zhang, Yu
Su, Wenzhen
Zhou, Qinghong
The complete chloroplast genome sequence of the Canna edulis Ker Gawl. (Cannaceae)
title The complete chloroplast genome sequence of the Canna edulis Ker Gawl. (Cannaceae)
title_full The complete chloroplast genome sequence of the Canna edulis Ker Gawl. (Cannaceae)
title_fullStr The complete chloroplast genome sequence of the Canna edulis Ker Gawl. (Cannaceae)
title_full_unstemmed The complete chloroplast genome sequence of the Canna edulis Ker Gawl. (Cannaceae)
title_short The complete chloroplast genome sequence of the Canna edulis Ker Gawl. (Cannaceae)
title_sort complete chloroplast genome sequence of the canna edulis ker gawl. (cannaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782134/
https://www.ncbi.nlm.nih.gov/pubmed/33457814
http://dx.doi.org/10.1080/23802359.2020.1775512
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