Characterization of the complete mitogenomes of the Asian Paradise Flycatcher Terpsiphone paradisi (Monarchidae) and phylogenetic analysis

The mitogenome of Terpsiphone paradisi is 16,951 bp in length and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes and one control region. The nucleotide frequencies of As, Ts, Cs, Gs of the mitogenome is 31.0%, 24.7%, 29.8% and 14.5%, respectively. All PCGs start with typical ATN...

Descripción completa

Detalles Bibliográficos
Autores principales: Hou, Xiang, Yuan, Hao, Du, Xiao-Juan, Gong, Hui-Sheng, Chang, Gang, Yang, Chao, Wang, Yan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782136/
https://www.ncbi.nlm.nih.gov/pubmed/33457856
http://dx.doi.org/10.1080/23802359.2020.1781561
_version_ 1783631831783964672
author Hou, Xiang
Yuan, Hao
Du, Xiao-Juan
Gong, Hui-Sheng
Chang, Gang
Yang, Chao
Wang, Yan
author_facet Hou, Xiang
Yuan, Hao
Du, Xiao-Juan
Gong, Hui-Sheng
Chang, Gang
Yang, Chao
Wang, Yan
author_sort Hou, Xiang
collection PubMed
description The mitogenome of Terpsiphone paradisi is 16,951 bp in length and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes and one control region. The nucleotide frequencies of As, Ts, Cs, Gs of the mitogenome is 31.0%, 24.7%, 29.8% and 14.5%, respectively. All PCGs start with typical ATN codon with the exception of COI genes, which use GTG as the initiation codon, and Most PCGs end with AGG, AGA, TAA, or TAG, except for COII, COIII and ND4, which terminated with T instead. Phylogenetic analysis indicated that genetic distances of T. paradisi and Terpsiphone atrocaudata was closer than other species.
format Online
Article
Text
id pubmed-7782136
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77821362021-01-14 Characterization of the complete mitogenomes of the Asian Paradise Flycatcher Terpsiphone paradisi (Monarchidae) and phylogenetic analysis Hou, Xiang Yuan, Hao Du, Xiao-Juan Gong, Hui-Sheng Chang, Gang Yang, Chao Wang, Yan Mitochondrial DNA B Resour Mitogenome Announcement The mitogenome of Terpsiphone paradisi is 16,951 bp in length and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes and one control region. The nucleotide frequencies of As, Ts, Cs, Gs of the mitogenome is 31.0%, 24.7%, 29.8% and 14.5%, respectively. All PCGs start with typical ATN codon with the exception of COI genes, which use GTG as the initiation codon, and Most PCGs end with AGG, AGA, TAA, or TAG, except for COII, COIII and ND4, which terminated with T instead. Phylogenetic analysis indicated that genetic distances of T. paradisi and Terpsiphone atrocaudata was closer than other species. Taylor & Francis 2020-06-22 /pmc/articles/PMC7782136/ /pubmed/33457856 http://dx.doi.org/10.1080/23802359.2020.1781561 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Hou, Xiang
Yuan, Hao
Du, Xiao-Juan
Gong, Hui-Sheng
Chang, Gang
Yang, Chao
Wang, Yan
Characterization of the complete mitogenomes of the Asian Paradise Flycatcher Terpsiphone paradisi (Monarchidae) and phylogenetic analysis
title Characterization of the complete mitogenomes of the Asian Paradise Flycatcher Terpsiphone paradisi (Monarchidae) and phylogenetic analysis
title_full Characterization of the complete mitogenomes of the Asian Paradise Flycatcher Terpsiphone paradisi (Monarchidae) and phylogenetic analysis
title_fullStr Characterization of the complete mitogenomes of the Asian Paradise Flycatcher Terpsiphone paradisi (Monarchidae) and phylogenetic analysis
title_full_unstemmed Characterization of the complete mitogenomes of the Asian Paradise Flycatcher Terpsiphone paradisi (Monarchidae) and phylogenetic analysis
title_short Characterization of the complete mitogenomes of the Asian Paradise Flycatcher Terpsiphone paradisi (Monarchidae) and phylogenetic analysis
title_sort characterization of the complete mitogenomes of the asian paradise flycatcher terpsiphone paradisi (monarchidae) and phylogenetic analysis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782136/
https://www.ncbi.nlm.nih.gov/pubmed/33457856
http://dx.doi.org/10.1080/23802359.2020.1781561
work_keys_str_mv AT houxiang characterizationofthecompletemitogenomesoftheasianparadiseflycatcherterpsiphoneparadisimonarchidaeandphylogeneticanalysis
AT yuanhao characterizationofthecompletemitogenomesoftheasianparadiseflycatcherterpsiphoneparadisimonarchidaeandphylogeneticanalysis
AT duxiaojuan characterizationofthecompletemitogenomesoftheasianparadiseflycatcherterpsiphoneparadisimonarchidaeandphylogeneticanalysis
AT gonghuisheng characterizationofthecompletemitogenomesoftheasianparadiseflycatcherterpsiphoneparadisimonarchidaeandphylogeneticanalysis
AT changgang characterizationofthecompletemitogenomesoftheasianparadiseflycatcherterpsiphoneparadisimonarchidaeandphylogeneticanalysis
AT yangchao characterizationofthecompletemitogenomesoftheasianparadiseflycatcherterpsiphoneparadisimonarchidaeandphylogeneticanalysis
AT wangyan characterizationofthecompletemitogenomesoftheasianparadiseflycatcherterpsiphoneparadisimonarchidaeandphylogeneticanalysis

Ejemplares similares