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Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae)

Caddisflies of Stenopsyche angustata (Trichoptera, Stenopsychidae) are widely distributed in various freshwater bodies and a few species inhabit marine environments. The mitochondrial genome was sequenced by Illumina high-throughput sequencing, and then the complete mitochondrial genome sequence was...

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Autores principales: Huang, Jing-Cai, Wang, Xiao-Xue, Zhong, Xi-Fa, Li, Yi-Min, Qin, Hong-Lin, Wang, Yu-Jun, Wang, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782142/
https://www.ncbi.nlm.nih.gov/pubmed/33458078
http://dx.doi.org/10.1080/23802359.2020.1797564
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author Huang, Jing-Cai
Wang, Xiao-Xue
Zhong, Xi-Fa
Li, Yi-Min
Qin, Hong-Lin
Wang, Yu-Jun
Wang, Hong
author_facet Huang, Jing-Cai
Wang, Xiao-Xue
Zhong, Xi-Fa
Li, Yi-Min
Qin, Hong-Lin
Wang, Yu-Jun
Wang, Hong
author_sort Huang, Jing-Cai
collection PubMed
description Caddisflies of Stenopsyche angustata (Trichoptera, Stenopsychidae) are widely distributed in various freshwater bodies and a few species inhabit marine environments. The mitochondrial genome was sequenced by Illumina high-throughput sequencing, and then the complete mitochondrial genome sequence was obtained through splicing and assembly. The mitochondrial genome sequence size was 15,371 bp, comprising 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a control region. Two of the protein-coding genes (COX 2 and nad 5) had an incomplete termination codon T. In addition, the start codon of all protein-coding genes was ATN, except for the start codon of the nad4l gene which was GTG. The base composition of the mitochondrial genome was 41.64% A, 35.03% T, 7.81% G, and 15.52% C.
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spelling pubmed-77821422021-01-14 Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae) Huang, Jing-Cai Wang, Xiao-Xue Zhong, Xi-Fa Li, Yi-Min Qin, Hong-Lin Wang, Yu-Jun Wang, Hong Mitochondrial DNA B Resour Mitogenome Announcement Caddisflies of Stenopsyche angustata (Trichoptera, Stenopsychidae) are widely distributed in various freshwater bodies and a few species inhabit marine environments. The mitochondrial genome was sequenced by Illumina high-throughput sequencing, and then the complete mitochondrial genome sequence was obtained through splicing and assembly. The mitochondrial genome sequence size was 15,371 bp, comprising 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a control region. Two of the protein-coding genes (COX 2 and nad 5) had an incomplete termination codon T. In addition, the start codon of all protein-coding genes was ATN, except for the start codon of the nad4l gene which was GTG. The base composition of the mitochondrial genome was 41.64% A, 35.03% T, 7.81% G, and 15.52% C. Taylor & Francis 2020-08-03 /pmc/articles/PMC7782142/ /pubmed/33458078 http://dx.doi.org/10.1080/23802359.2020.1797564 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Huang, Jing-Cai
Wang, Xiao-Xue
Zhong, Xi-Fa
Li, Yi-Min
Qin, Hong-Lin
Wang, Yu-Jun
Wang, Hong
Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae)
title Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae)
title_full Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae)
title_fullStr Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae)
title_full_unstemmed Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae)
title_short Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae)
title_sort characterization of the complete mitochondrial genome of stenopsyche angustata (trichoptera, stenopsychidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782142/
https://www.ncbi.nlm.nih.gov/pubmed/33458078
http://dx.doi.org/10.1080/23802359.2020.1797564
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