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Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae)
Caddisflies of Stenopsyche angustata (Trichoptera, Stenopsychidae) are widely distributed in various freshwater bodies and a few species inhabit marine environments. The mitochondrial genome was sequenced by Illumina high-throughput sequencing, and then the complete mitochondrial genome sequence was...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782142/ https://www.ncbi.nlm.nih.gov/pubmed/33458078 http://dx.doi.org/10.1080/23802359.2020.1797564 |
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author | Huang, Jing-Cai Wang, Xiao-Xue Zhong, Xi-Fa Li, Yi-Min Qin, Hong-Lin Wang, Yu-Jun Wang, Hong |
author_facet | Huang, Jing-Cai Wang, Xiao-Xue Zhong, Xi-Fa Li, Yi-Min Qin, Hong-Lin Wang, Yu-Jun Wang, Hong |
author_sort | Huang, Jing-Cai |
collection | PubMed |
description | Caddisflies of Stenopsyche angustata (Trichoptera, Stenopsychidae) are widely distributed in various freshwater bodies and a few species inhabit marine environments. The mitochondrial genome was sequenced by Illumina high-throughput sequencing, and then the complete mitochondrial genome sequence was obtained through splicing and assembly. The mitochondrial genome sequence size was 15,371 bp, comprising 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a control region. Two of the protein-coding genes (COX 2 and nad 5) had an incomplete termination codon T. In addition, the start codon of all protein-coding genes was ATN, except for the start codon of the nad4l gene which was GTG. The base composition of the mitochondrial genome was 41.64% A, 35.03% T, 7.81% G, and 15.52% C. |
format | Online Article Text |
id | pubmed-7782142 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77821422021-01-14 Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae) Huang, Jing-Cai Wang, Xiao-Xue Zhong, Xi-Fa Li, Yi-Min Qin, Hong-Lin Wang, Yu-Jun Wang, Hong Mitochondrial DNA B Resour Mitogenome Announcement Caddisflies of Stenopsyche angustata (Trichoptera, Stenopsychidae) are widely distributed in various freshwater bodies and a few species inhabit marine environments. The mitochondrial genome was sequenced by Illumina high-throughput sequencing, and then the complete mitochondrial genome sequence was obtained through splicing and assembly. The mitochondrial genome sequence size was 15,371 bp, comprising 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a control region. Two of the protein-coding genes (COX 2 and nad 5) had an incomplete termination codon T. In addition, the start codon of all protein-coding genes was ATN, except for the start codon of the nad4l gene which was GTG. The base composition of the mitochondrial genome was 41.64% A, 35.03% T, 7.81% G, and 15.52% C. Taylor & Francis 2020-08-03 /pmc/articles/PMC7782142/ /pubmed/33458078 http://dx.doi.org/10.1080/23802359.2020.1797564 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Huang, Jing-Cai Wang, Xiao-Xue Zhong, Xi-Fa Li, Yi-Min Qin, Hong-Lin Wang, Yu-Jun Wang, Hong Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae) |
title | Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae) |
title_full | Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae) |
title_fullStr | Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae) |
title_full_unstemmed | Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae) |
title_short | Characterization of the complete mitochondrial genome of Stenopsyche angustata (Trichoptera, Stenopsychidae) |
title_sort | characterization of the complete mitochondrial genome of stenopsyche angustata (trichoptera, stenopsychidae) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782142/ https://www.ncbi.nlm.nih.gov/pubmed/33458078 http://dx.doi.org/10.1080/23802359.2020.1797564 |
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