The complete chloroplast genome sequence of Vitis berlandieri

Vitis berlandieri, a species of grape native to the southern North America, is known for good tolerance against soils with a high content of lime and was almost used for rootstock breeding. Here, we report the complete chloroplast genome of V. berlandieri. The chloroplast genome was 161,028 bp in le...

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Autores principales: Xiang, Jiang, Cheng, Jianhui, Wei, Lingzhu, Cui, Pengfei, Li, Mingshan, Wu, Jiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
MitoGenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782149/
https://www.ncbi.nlm.nih.gov/pubmed/33458054
http://dx.doi.org/10.1080/23802359.2020.1797566
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author Xiang, Jiang
Cheng, Jianhui
Wei, Lingzhu
Cui, Pengfei
Li, Mingshan
Wu, Jiang
author_facet Xiang, Jiang
Cheng, Jianhui
Wei, Lingzhu
Cui, Pengfei
Li, Mingshan
Wu, Jiang
author_sort Xiang, Jiang
collection PubMed
description Vitis berlandieri, a species of grape native to the southern North America, is known for good tolerance against soils with a high content of lime and was almost used for rootstock breeding. Here, we report the complete chloroplast genome of V. berlandieri. The chloroplast genome was 161,028 bp in length, harboring a large single-copy region (89,228 bp) and a small single-copy region (19,028 bp) separated by two inverted repeat regions. A total of 130 unique genes were identified from this genome, including 85 protein-coding genes (PCGs), 37 tRNA genes, and 8 rRNA genes. Chloroplast phylogenetic analysis revealed that V. berlandieri is closely related to V. cordifolia.
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spelling pubmed-77821492021-01-14 The complete chloroplast genome sequence of Vitis berlandieri Xiang, Jiang Cheng, Jianhui Wei, Lingzhu Cui, Pengfei Li, Mingshan Wu, Jiang Mitochondrial DNA B Resour MitoGenome Announcement Vitis berlandieri, a species of grape native to the southern North America, is known for good tolerance against soils with a high content of lime and was almost used for rootstock breeding. Here, we report the complete chloroplast genome of V. berlandieri. The chloroplast genome was 161,028 bp in length, harboring a large single-copy region (89,228 bp) and a small single-copy region (19,028 bp) separated by two inverted repeat regions. A total of 130 unique genes were identified from this genome, including 85 protein-coding genes (PCGs), 37 tRNA genes, and 8 rRNA genes. Chloroplast phylogenetic analysis revealed that V. berlandieri is closely related to V. cordifolia. Taylor & Francis 2020-07-29 /pmc/articles/PMC7782149/ /pubmed/33458054 http://dx.doi.org/10.1080/23802359.2020.1797566 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle MitoGenome Announcement
Xiang, Jiang
Cheng, Jianhui
Wei, Lingzhu
Cui, Pengfei
Li, Mingshan
Wu, Jiang
The complete chloroplast genome sequence of Vitis berlandieri
title The complete chloroplast genome sequence of Vitis berlandieri
title_full The complete chloroplast genome sequence of Vitis berlandieri
title_fullStr The complete chloroplast genome sequence of Vitis berlandieri
title_full_unstemmed The complete chloroplast genome sequence of Vitis berlandieri
title_short The complete chloroplast genome sequence of Vitis berlandieri
title_sort complete chloroplast genome sequence of vitis berlandieri
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782149/
https://www.ncbi.nlm.nih.gov/pubmed/33458054
http://dx.doi.org/10.1080/23802359.2020.1797566
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