The complete mitochondrial genome of Pseudocolochirus violaceus (Cucumariidae, Dendrochirotida)

The complete mitochondrial genome of Pseudocolochirus violaceus was obtained and described in this study. This complete mitochondrial genome is 15,752 bp in length and consists of 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. Except ND6 and 5 tRNAs, the others were encod...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Yan, Zeng, Ling, Wen, Jing, Li, Xuyan, Huang, Yafen, Sun, Yulin, Zhao, Juan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782155/
https://www.ncbi.nlm.nih.gov/pubmed/33457954
http://dx.doi.org/10.1080/23802359.2020.1788455
_version_ 1783631836330590208
author Wang, Yan
Zeng, Ling
Wen, Jing
Li, Xuyan
Huang, Yafen
Sun, Yulin
Zhao, Juan
author_facet Wang, Yan
Zeng, Ling
Wen, Jing
Li, Xuyan
Huang, Yafen
Sun, Yulin
Zhao, Juan
author_sort Wang, Yan
collection PubMed
description The complete mitochondrial genome of Pseudocolochirus violaceus was obtained and described in this study. This complete mitochondrial genome is 15,752 bp in length and consists of 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. Except ND6 and 5 tRNAs, the others were encoded by the heavy strand. The overall base composition of the heavy-strand was 38.65% A, 12.09% G, 24.31% C, and 24.95% T, with a high A + T content of 63.6%. The phylogenetic analysis suggested that P. violaceus was closest to Cucumaria miniata. The newly described mitochondrial genome may provide valuable data for phylogenetic analysis for Holothuroidea.
format Online
Article
Text
id pubmed-7782155
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77821552021-01-14 The complete mitochondrial genome of Pseudocolochirus violaceus (Cucumariidae, Dendrochirotida) Wang, Yan Zeng, Ling Wen, Jing Li, Xuyan Huang, Yafen Sun, Yulin Zhao, Juan Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Pseudocolochirus violaceus was obtained and described in this study. This complete mitochondrial genome is 15,752 bp in length and consists of 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. Except ND6 and 5 tRNAs, the others were encoded by the heavy strand. The overall base composition of the heavy-strand was 38.65% A, 12.09% G, 24.31% C, and 24.95% T, with a high A + T content of 63.6%. The phylogenetic analysis suggested that P. violaceus was closest to Cucumaria miniata. The newly described mitochondrial genome may provide valuable data for phylogenetic analysis for Holothuroidea. Taylor & Francis 2020-07-14 /pmc/articles/PMC7782155/ /pubmed/33457954 http://dx.doi.org/10.1080/23802359.2020.1788455 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wang, Yan
Zeng, Ling
Wen, Jing
Li, Xuyan
Huang, Yafen
Sun, Yulin
Zhao, Juan
The complete mitochondrial genome of Pseudocolochirus violaceus (Cucumariidae, Dendrochirotida)
title The complete mitochondrial genome of Pseudocolochirus violaceus (Cucumariidae, Dendrochirotida)
title_full The complete mitochondrial genome of Pseudocolochirus violaceus (Cucumariidae, Dendrochirotida)
title_fullStr The complete mitochondrial genome of Pseudocolochirus violaceus (Cucumariidae, Dendrochirotida)
title_full_unstemmed The complete mitochondrial genome of Pseudocolochirus violaceus (Cucumariidae, Dendrochirotida)
title_short The complete mitochondrial genome of Pseudocolochirus violaceus (Cucumariidae, Dendrochirotida)
title_sort complete mitochondrial genome of pseudocolochirus violaceus (cucumariidae, dendrochirotida)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782155/
https://www.ncbi.nlm.nih.gov/pubmed/33457954
http://dx.doi.org/10.1080/23802359.2020.1788455
work_keys_str_mv AT wangyan thecompletemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT zengling thecompletemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT wenjing thecompletemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT lixuyan thecompletemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT huangyafen thecompletemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT sunyulin thecompletemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT zhaojuan thecompletemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT wangyan completemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT zengling completemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT wenjing completemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT lixuyan completemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT huangyafen completemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT sunyulin completemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida
AT zhaojuan completemitochondrialgenomeofpseudocolochirusviolaceuscucumariidaedendrochirotida

Ejemplares similares