Cargando…
The complete mitochondrial genome of Aesop slipper lobster Scyllarides haanii (De Haan, 1841)
The complete mitochondrial genome of Scyllarides haanii from South China Sea was first determined and characterized. With a length of 15,666 bp, the circular mitogenome of S. haanii consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region. The nucleotide comp...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782161/ https://www.ncbi.nlm.nih.gov/pubmed/33458186 http://dx.doi.org/10.1080/23802359.2020.1823274 |
_version_ | 1783631837783916544 |
---|---|
author | Liu, Hongtao Wang, Guofu |
author_facet | Liu, Hongtao Wang, Guofu |
author_sort | Liu, Hongtao |
collection | PubMed |
description | The complete mitochondrial genome of Scyllarides haanii from South China Sea was first determined and characterized. With a length of 15,666 bp, the circular mitogenome of S. haanii consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region. The nucleotide composition is significantly biased (A, G, T, and C was 32.05%, 12.45%, 33.97%, and 21.53%, respectively) with A + T contents of 66.02%. Two PCGs used an unusual initiation codon, and five PCGs were ended with an uncomplete or abnormal stop codon. One microsatellite was identified in the mitogenome located in ND4 gene. Phylogenetic analysis demonstrated that S. haanii was first clustered with Scyllarides squammosus, then together with Scyllarides latus. |
format | Online Article Text |
id | pubmed-7782161 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77821612021-01-14 The complete mitochondrial genome of Aesop slipper lobster Scyllarides haanii (De Haan, 1841) Liu, Hongtao Wang, Guofu Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of Scyllarides haanii from South China Sea was first determined and characterized. With a length of 15,666 bp, the circular mitogenome of S. haanii consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region. The nucleotide composition is significantly biased (A, G, T, and C was 32.05%, 12.45%, 33.97%, and 21.53%, respectively) with A + T contents of 66.02%. Two PCGs used an unusual initiation codon, and five PCGs were ended with an uncomplete or abnormal stop codon. One microsatellite was identified in the mitogenome located in ND4 gene. Phylogenetic analysis demonstrated that S. haanii was first clustered with Scyllarides squammosus, then together with Scyllarides latus. Taylor & Francis 2020-09-22 /pmc/articles/PMC7782161/ /pubmed/33458186 http://dx.doi.org/10.1080/23802359.2020.1823274 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Liu, Hongtao Wang, Guofu The complete mitochondrial genome of Aesop slipper lobster Scyllarides haanii (De Haan, 1841) |
title | The complete mitochondrial genome of Aesop slipper lobster Scyllarides haanii (De Haan, 1841) |
title_full | The complete mitochondrial genome of Aesop slipper lobster Scyllarides haanii (De Haan, 1841) |
title_fullStr | The complete mitochondrial genome of Aesop slipper lobster Scyllarides haanii (De Haan, 1841) |
title_full_unstemmed | The complete mitochondrial genome of Aesop slipper lobster Scyllarides haanii (De Haan, 1841) |
title_short | The complete mitochondrial genome of Aesop slipper lobster Scyllarides haanii (De Haan, 1841) |
title_sort | complete mitochondrial genome of aesop slipper lobster scyllarides haanii (de haan, 1841) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782161/ https://www.ncbi.nlm.nih.gov/pubmed/33458186 http://dx.doi.org/10.1080/23802359.2020.1823274 |
work_keys_str_mv | AT liuhongtao thecompletemitochondrialgenomeofaesopslipperlobsterscyllarideshaaniidehaan1841 AT wangguofu thecompletemitochondrialgenomeofaesopslipperlobsterscyllarideshaaniidehaan1841 AT liuhongtao completemitochondrialgenomeofaesopslipperlobsterscyllarideshaaniidehaan1841 AT wangguofu completemitochondrialgenomeofaesopslipperlobsterscyllarideshaaniidehaan1841 |