Characterization of the complete chloroplast genome of Liriope platyphylla (Asparagaceae: Nolinoideae) isolated in Korea

Liriope platyphylla is used as an important medicinal plant for fatigue, cough, and inflammation in South Korea. Here, we report the complete chloroplast genome of L. platyphylla. The total genome size of the chloroplast is 157,076 bp with a large single-copy region (LSC: 85,374 bp), a small single-...

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Autores principales: Jang, Ji-Hun, Jung, Ho-Kyung, Park, Ho, Lee, Kyung-Min, Kim, Ji-Kyung, Hwang, Tae-Yeon, Cho, Hyun-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782188/
https://www.ncbi.nlm.nih.gov/pubmed/33457984
http://dx.doi.org/10.1080/23802359.2020.1787898
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author Jang, Ji-Hun
Jung, Ho-Kyung
Park, Ho
Lee, Kyung-Min
Kim, Ji-Kyung
Hwang, Tae-Yeon
Cho, Hyun-Woo
author_facet Jang, Ji-Hun
Jung, Ho-Kyung
Park, Ho
Lee, Kyung-Min
Kim, Ji-Kyung
Hwang, Tae-Yeon
Cho, Hyun-Woo
author_sort Jang, Ji-Hun
collection PubMed
description Liriope platyphylla is used as an important medicinal plant for fatigue, cough, and inflammation in South Korea. Here, we report the complete chloroplast genome of L. platyphylla. The total genome size of the chloroplast is 157,076 bp with a large single-copy region (LSC: 85,374 bp), a small single-copy region (SSC: 18,748 bp), and inverted repeat regions (IRa and IRb: 26,477 bp). The GC content of the L. platyphylla chloroplast was 37.6%. The cp genome encoded a set of 129 genes, including 83 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The phylogenetic tree analysis indicated that L. platyphylla is closely related to L. spicata.
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spelling pubmed-77821882021-01-14 Characterization of the complete chloroplast genome of Liriope platyphylla (Asparagaceae: Nolinoideae) isolated in Korea Jang, Ji-Hun Jung, Ho-Kyung Park, Ho Lee, Kyung-Min Kim, Ji-Kyung Hwang, Tae-Yeon Cho, Hyun-Woo Mitochondrial DNA B Resour Mitogenome Announcement Liriope platyphylla is used as an important medicinal plant for fatigue, cough, and inflammation in South Korea. Here, we report the complete chloroplast genome of L. platyphylla. The total genome size of the chloroplast is 157,076 bp with a large single-copy region (LSC: 85,374 bp), a small single-copy region (SSC: 18,748 bp), and inverted repeat regions (IRa and IRb: 26,477 bp). The GC content of the L. platyphylla chloroplast was 37.6%. The cp genome encoded a set of 129 genes, including 83 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. The phylogenetic tree analysis indicated that L. platyphylla is closely related to L. spicata. Taylor & Francis 2020-07-20 /pmc/articles/PMC7782188/ /pubmed/33457984 http://dx.doi.org/10.1080/23802359.2020.1787898 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Jang, Ji-Hun
Jung, Ho-Kyung
Park, Ho
Lee, Kyung-Min
Kim, Ji-Kyung
Hwang, Tae-Yeon
Cho, Hyun-Woo
Characterization of the complete chloroplast genome of Liriope platyphylla (Asparagaceae: Nolinoideae) isolated in Korea
title Characterization of the complete chloroplast genome of Liriope platyphylla (Asparagaceae: Nolinoideae) isolated in Korea
title_full Characterization of the complete chloroplast genome of Liriope platyphylla (Asparagaceae: Nolinoideae) isolated in Korea
title_fullStr Characterization of the complete chloroplast genome of Liriope platyphylla (Asparagaceae: Nolinoideae) isolated in Korea
title_full_unstemmed Characterization of the complete chloroplast genome of Liriope platyphylla (Asparagaceae: Nolinoideae) isolated in Korea
title_short Characterization of the complete chloroplast genome of Liriope platyphylla (Asparagaceae: Nolinoideae) isolated in Korea
title_sort characterization of the complete chloroplast genome of liriope platyphylla (asparagaceae: nolinoideae) isolated in korea
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782188/
https://www.ncbi.nlm.nih.gov/pubmed/33457984
http://dx.doi.org/10.1080/23802359.2020.1787898
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