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The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China

Brechemia lineata is a well-known medicinal plant in the Rhamnaceae family and widely used in traditional Chinese medicine. Here, we sequenced the complete chloroplast genome using Illumina pair-end sequencing data. The chloroplast genome was 154,962 bp in length, consisting of a large single-copy (...

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Detalles Bibliográficos
Autores principales: Xie, Xiaohong, Liu, Detuan, Wariss, Hafiz Muhammad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782211/
https://www.ncbi.nlm.nih.gov/pubmed/33457996
http://dx.doi.org/10.1080/23802359.2020.1791749
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author Xie, Xiaohong
Liu, Detuan
Wariss, Hafiz Muhammad
author_facet Xie, Xiaohong
Liu, Detuan
Wariss, Hafiz Muhammad
author_sort Xie, Xiaohong
collection PubMed
description Brechemia lineata is a well-known medicinal plant in the Rhamnaceae family and widely used in traditional Chinese medicine. Here, we sequenced the complete chloroplast genome using Illumina pair-end sequencing data. The chloroplast genome was 154,962 bp in length, consisting of a large single-copy (LSC) region of 82,928 bp, a small single-copy (SSC) region of 17,376 bp, and a pair of inverted repeat (IR) regions of 27,329 bp. The chloroplast genome consists of 112 unique genes, including 78 protein-coding genes, 30 transfer RNA, and 4 ribosomal RNA genes. The overall GC content of the chloroplast genome was 37.0%. The phylogenetic analysis suggests close relationship of B. lineata with other Berchemia species. These genomic resources will be valuable resource for systematic and phylogenetic studies of Berchemia genus.
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spelling pubmed-77822112021-01-14 The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China Xie, Xiaohong Liu, Detuan Wariss, Hafiz Muhammad Mitochondrial DNA B Resour Mitogenome Announcement Brechemia lineata is a well-known medicinal plant in the Rhamnaceae family and widely used in traditional Chinese medicine. Here, we sequenced the complete chloroplast genome using Illumina pair-end sequencing data. The chloroplast genome was 154,962 bp in length, consisting of a large single-copy (LSC) region of 82,928 bp, a small single-copy (SSC) region of 17,376 bp, and a pair of inverted repeat (IR) regions of 27,329 bp. The chloroplast genome consists of 112 unique genes, including 78 protein-coding genes, 30 transfer RNA, and 4 ribosomal RNA genes. The overall GC content of the chloroplast genome was 37.0%. The phylogenetic analysis suggests close relationship of B. lineata with other Berchemia species. These genomic resources will be valuable resource for systematic and phylogenetic studies of Berchemia genus. Taylor & Francis 2020-07-20 /pmc/articles/PMC7782211/ /pubmed/33457996 http://dx.doi.org/10.1080/23802359.2020.1791749 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xie, Xiaohong
Liu, Detuan
Wariss, Hafiz Muhammad
The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China
title The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China
title_full The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China
title_fullStr The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China
title_full_unstemmed The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China
title_short The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China
title_sort complete chloroplast genome of berchemia lineata, an important medicinal plant from china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782211/
https://www.ncbi.nlm.nih.gov/pubmed/33457996
http://dx.doi.org/10.1080/23802359.2020.1791749
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