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The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China
Brechemia lineata is a well-known medicinal plant in the Rhamnaceae family and widely used in traditional Chinese medicine. Here, we sequenced the complete chloroplast genome using Illumina pair-end sequencing data. The chloroplast genome was 154,962 bp in length, consisting of a large single-copy (...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782211/ https://www.ncbi.nlm.nih.gov/pubmed/33457996 http://dx.doi.org/10.1080/23802359.2020.1791749 |
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author | Xie, Xiaohong Liu, Detuan Wariss, Hafiz Muhammad |
author_facet | Xie, Xiaohong Liu, Detuan Wariss, Hafiz Muhammad |
author_sort | Xie, Xiaohong |
collection | PubMed |
description | Brechemia lineata is a well-known medicinal plant in the Rhamnaceae family and widely used in traditional Chinese medicine. Here, we sequenced the complete chloroplast genome using Illumina pair-end sequencing data. The chloroplast genome was 154,962 bp in length, consisting of a large single-copy (LSC) region of 82,928 bp, a small single-copy (SSC) region of 17,376 bp, and a pair of inverted repeat (IR) regions of 27,329 bp. The chloroplast genome consists of 112 unique genes, including 78 protein-coding genes, 30 transfer RNA, and 4 ribosomal RNA genes. The overall GC content of the chloroplast genome was 37.0%. The phylogenetic analysis suggests close relationship of B. lineata with other Berchemia species. These genomic resources will be valuable resource for systematic and phylogenetic studies of Berchemia genus. |
format | Online Article Text |
id | pubmed-7782211 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77822112021-01-14 The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China Xie, Xiaohong Liu, Detuan Wariss, Hafiz Muhammad Mitochondrial DNA B Resour Mitogenome Announcement Brechemia lineata is a well-known medicinal plant in the Rhamnaceae family and widely used in traditional Chinese medicine. Here, we sequenced the complete chloroplast genome using Illumina pair-end sequencing data. The chloroplast genome was 154,962 bp in length, consisting of a large single-copy (LSC) region of 82,928 bp, a small single-copy (SSC) region of 17,376 bp, and a pair of inverted repeat (IR) regions of 27,329 bp. The chloroplast genome consists of 112 unique genes, including 78 protein-coding genes, 30 transfer RNA, and 4 ribosomal RNA genes. The overall GC content of the chloroplast genome was 37.0%. The phylogenetic analysis suggests close relationship of B. lineata with other Berchemia species. These genomic resources will be valuable resource for systematic and phylogenetic studies of Berchemia genus. Taylor & Francis 2020-07-20 /pmc/articles/PMC7782211/ /pubmed/33457996 http://dx.doi.org/10.1080/23802359.2020.1791749 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Xie, Xiaohong Liu, Detuan Wariss, Hafiz Muhammad The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China |
title | The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China |
title_full | The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China |
title_fullStr | The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China |
title_full_unstemmed | The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China |
title_short | The complete chloroplast genome of Berchemia lineata, an important medicinal plant from China |
title_sort | complete chloroplast genome of berchemia lineata, an important medicinal plant from china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782211/ https://www.ncbi.nlm.nih.gov/pubmed/33457996 http://dx.doi.org/10.1080/23802359.2020.1791749 |
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