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The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering
The complete chloroplast genome of Catalpa ‘Bairihua’ a hybrid variety with multi season flowering obtained from hybrid progeny of C. bungei ‘Luoqiu Sihao’ (C. bungei ‘01’ × C. bungei ‘Changguo Qiu’) and C. fargesii f. duclouxii was first sequenced with the Illumina HiSeq 2000 platform. Which was 15...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2020
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782214/ https://www.ncbi.nlm.nih.gov/pubmed/33457939 http://dx.doi.org/10.1080/23802359.2020.1788445 |
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author | Li, Wen-Qing Lu, Yi-Zeng Xie, Xiao-Man Han, Yi Wang, Ning Sun, Tao Liu, Li-Jiang Wang, Yan Zhuang, Zhen-Jie Gao, Guang-Chen Liu, Tao Zhao, Li-Jun |
author_facet | Li, Wen-Qing Lu, Yi-Zeng Xie, Xiao-Man Han, Yi Wang, Ning Sun, Tao Liu, Li-Jiang Wang, Yan Zhuang, Zhen-Jie Gao, Guang-Chen Liu, Tao Zhao, Li-Jun |
author_sort | Li, Wen-Qing |
collection | PubMed |
description | The complete chloroplast genome of Catalpa ‘Bairihua’ a hybrid variety with multi season flowering obtained from hybrid progeny of C. bungei ‘Luoqiu Sihao’ (C. bungei ‘01’ × C. bungei ‘Changguo Qiu’) and C. fargesii f. duclouxii was first sequenced with the Illumina HiSeq 2000 platform. Which was 158,210 bp in length with a typical quadruple structure and contained a large single copy (LSC: 84,928 bp) region and a small single copy (SSC: 12,664 bp) region that were separated by a pair of inverted repeats (IRa, b: 30,309 bp) region. The GC content of the whole chloroplast genome is 38.1%. A total of 130 genes was annotated in the complete chloroplast genome, including 85 protein-coding genes, 37 tRNA genes and 8rRNA genes. ML phylogenetic analysis by comparing with 39 chloroplast genomes of the Bignoniaceae indicated that Catalpa ‘Bairihua’ was close to Tecomaria capensis. |
format | Online Article Text |
id | pubmed-7782214 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77822142021-01-14 The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering Li, Wen-Qing Lu, Yi-Zeng Xie, Xiao-Man Han, Yi Wang, Ning Sun, Tao Liu, Li-Jiang Wang, Yan Zhuang, Zhen-Jie Gao, Guang-Chen Liu, Tao Zhao, Li-Jun Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Catalpa ‘Bairihua’ a hybrid variety with multi season flowering obtained from hybrid progeny of C. bungei ‘Luoqiu Sihao’ (C. bungei ‘01’ × C. bungei ‘Changguo Qiu’) and C. fargesii f. duclouxii was first sequenced with the Illumina HiSeq 2000 platform. Which was 158,210 bp in length with a typical quadruple structure and contained a large single copy (LSC: 84,928 bp) region and a small single copy (SSC: 12,664 bp) region that were separated by a pair of inverted repeats (IRa, b: 30,309 bp) region. The GC content of the whole chloroplast genome is 38.1%. A total of 130 genes was annotated in the complete chloroplast genome, including 85 protein-coding genes, 37 tRNA genes and 8rRNA genes. ML phylogenetic analysis by comparing with 39 chloroplast genomes of the Bignoniaceae indicated that Catalpa ‘Bairihua’ was close to Tecomaria capensis. Taylor & Francis 2020-07-11 /pmc/articles/PMC7782214/ /pubmed/33457939 http://dx.doi.org/10.1080/23802359.2020.1788445 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Li, Wen-Qing Lu, Yi-Zeng Xie, Xiao-Man Han, Yi Wang, Ning Sun, Tao Liu, Li-Jiang Wang, Yan Zhuang, Zhen-Jie Gao, Guang-Chen Liu, Tao Zhao, Li-Jun The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
title | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
title_full | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
title_fullStr | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
title_full_unstemmed | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
title_short | The complete chloroplast genome of Catalpa ‘Bairihua’, a hybrid variety with multi season flowering |
title_sort | complete chloroplast genome of catalpa ‘bairihua’, a hybrid variety with multi season flowering |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782214/ https://www.ncbi.nlm.nih.gov/pubmed/33457939 http://dx.doi.org/10.1080/23802359.2020.1788445 |
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