The complete chloroplast genome of Cryptomeria japonica var. sinensis (Cupressaceae)

The complete chloroplast genome of Cryptomeria japonica var. sinensis Miquel was assembled and analyzed. The chloroplast genome of C. japonica var. sinensis Miquel did not have a typical quadripartite structure with the inverted repeats (IR) absent, and the size of C. japonica var. sinensis is 131,4...

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Autores principales: Xie, Wei-Wei, Li, Jun-Nan, Ye, Bao-Jian, Zhang, Fei-Ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782222/
https://www.ncbi.nlm.nih.gov/pubmed/33458182
http://dx.doi.org/10.1080/23802359.2020.1821812
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author Xie, Wei-Wei
Li, Jun-Nan
Ye, Bao-Jian
Zhang, Fei-Ping
author_facet Xie, Wei-Wei
Li, Jun-Nan
Ye, Bao-Jian
Zhang, Fei-Ping
author_sort Xie, Wei-Wei
collection PubMed
description The complete chloroplast genome of Cryptomeria japonica var. sinensis Miquel was assembled and analyzed. The chloroplast genome of C. japonica var. sinensis Miquel did not have a typical quadripartite structure with the inverted repeats (IR) absent, and the size of C. japonica var. sinensis is 131,412 bp. The overall GC content was 35.4%. The genome encoded a set of 119 genes, containing 83 protein-coding genes, 32 tRNA genes, and 4 rRNA genes. Phylogenomic analysis indicated that C. japonica var. sinensis is sister to C. japonica (Thunb. ex L. f.) D. Don.
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spelling pubmed-77822222021-01-14 The complete chloroplast genome of Cryptomeria japonica var. sinensis (Cupressaceae) Xie, Wei-Wei Li, Jun-Nan Ye, Bao-Jian Zhang, Fei-Ping Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Cryptomeria japonica var. sinensis Miquel was assembled and analyzed. The chloroplast genome of C. japonica var. sinensis Miquel did not have a typical quadripartite structure with the inverted repeats (IR) absent, and the size of C. japonica var. sinensis is 131,412 bp. The overall GC content was 35.4%. The genome encoded a set of 119 genes, containing 83 protein-coding genes, 32 tRNA genes, and 4 rRNA genes. Phylogenomic analysis indicated that C. japonica var. sinensis is sister to C. japonica (Thunb. ex L. f.) D. Don. Taylor & Francis 2020-09-21 /pmc/articles/PMC7782222/ /pubmed/33458182 http://dx.doi.org/10.1080/23802359.2020.1821812 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xie, Wei-Wei
Li, Jun-Nan
Ye, Bao-Jian
Zhang, Fei-Ping
The complete chloroplast genome of Cryptomeria japonica var. sinensis (Cupressaceae)
title The complete chloroplast genome of Cryptomeria japonica var. sinensis (Cupressaceae)
title_full The complete chloroplast genome of Cryptomeria japonica var. sinensis (Cupressaceae)
title_fullStr The complete chloroplast genome of Cryptomeria japonica var. sinensis (Cupressaceae)
title_full_unstemmed The complete chloroplast genome of Cryptomeria japonica var. sinensis (Cupressaceae)
title_short The complete chloroplast genome of Cryptomeria japonica var. sinensis (Cupressaceae)
title_sort complete chloroplast genome of cryptomeria japonica var. sinensis (cupressaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782222/
https://www.ncbi.nlm.nih.gov/pubmed/33458182
http://dx.doi.org/10.1080/23802359.2020.1821812
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