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Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China
Euryale ferox belongs to the family Nymphaeaceae that has been used as foods and medicines in China. In this study, we had been completed the complete chloroplast genome of Euryale ferox, which is 159,930 bp in length and has four sub-regions. The complete chloroplast genome sequence of Euryale fero...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782232/ https://www.ncbi.nlm.nih.gov/pubmed/33457802 http://dx.doi.org/10.1080/23802359.2020.1775516 |
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author | Guo, Zhiyong Min, Jie |
author_facet | Guo, Zhiyong Min, Jie |
author_sort | Guo, Zhiyong |
collection | PubMed |
description | Euryale ferox belongs to the family Nymphaeaceae that has been used as foods and medicines in China. In this study, we had been completed the complete chloroplast genome of Euryale ferox, which is 159,930 bp in length and has four sub-regions. The complete chloroplast genome sequence of Euryale ferox contains 89,678 bp of a large single-copy region (LSC), 22,202 bp of small single-copy region (SSC) and 25,025 bp of two inverted repeat regions (IRs). The complete chloroplast genome of Euryale ferox is also consistent with other chloroplast genomes most plant species. The overall nucleotide composition of chloroplast genome sequence has: A (30.1%), T (30.8%), C (19.9%), G (19.2%) and the total GC content of 39.1%. Its sequence contains 127 genes, including 84 encoding genes, 35 transfer RNA genes and 8 ribosomal RNA genes. As the analysis result, the ML tree presents that Euryale ferox clustered with Nuphar advena belonging to the family Nymphaeaceae in genetic evolution relationship by the maximum likelihood (ML) methods. |
format | Online Article Text |
id | pubmed-7782232 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77822322021-01-14 Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China Guo, Zhiyong Min, Jie Mitochondrial DNA B Resour Mitogenome Announcement Euryale ferox belongs to the family Nymphaeaceae that has been used as foods and medicines in China. In this study, we had been completed the complete chloroplast genome of Euryale ferox, which is 159,930 bp in length and has four sub-regions. The complete chloroplast genome sequence of Euryale ferox contains 89,678 bp of a large single-copy region (LSC), 22,202 bp of small single-copy region (SSC) and 25,025 bp of two inverted repeat regions (IRs). The complete chloroplast genome of Euryale ferox is also consistent with other chloroplast genomes most plant species. The overall nucleotide composition of chloroplast genome sequence has: A (30.1%), T (30.8%), C (19.9%), G (19.2%) and the total GC content of 39.1%. Its sequence contains 127 genes, including 84 encoding genes, 35 transfer RNA genes and 8 ribosomal RNA genes. As the analysis result, the ML tree presents that Euryale ferox clustered with Nuphar advena belonging to the family Nymphaeaceae in genetic evolution relationship by the maximum likelihood (ML) methods. Taylor & Francis 2020-06-08 /pmc/articles/PMC7782232/ /pubmed/33457802 http://dx.doi.org/10.1080/23802359.2020.1775516 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Guo, Zhiyong Min, Jie Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China |
title | Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China |
title_full | Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China |
title_fullStr | Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China |
title_full_unstemmed | Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China |
title_short | Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China |
title_sort | characterization the complete chloroplast genome of euryale ferox (nymphaeaceae), an medicinal plant species in china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782232/ https://www.ncbi.nlm.nih.gov/pubmed/33457802 http://dx.doi.org/10.1080/23802359.2020.1775516 |
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