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Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China

Euryale ferox belongs to the family Nymphaeaceae that has been used as foods and medicines in China. In this study, we had been completed the complete chloroplast genome of Euryale ferox, which is 159,930 bp in length and has four sub-regions. The complete chloroplast genome sequence of Euryale fero...

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Autores principales: Guo, Zhiyong, Min, Jie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782232/
https://www.ncbi.nlm.nih.gov/pubmed/33457802
http://dx.doi.org/10.1080/23802359.2020.1775516
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author Guo, Zhiyong
Min, Jie
author_facet Guo, Zhiyong
Min, Jie
author_sort Guo, Zhiyong
collection PubMed
description Euryale ferox belongs to the family Nymphaeaceae that has been used as foods and medicines in China. In this study, we had been completed the complete chloroplast genome of Euryale ferox, which is 159,930 bp in length and has four sub-regions. The complete chloroplast genome sequence of Euryale ferox contains 89,678 bp of a large single-copy region (LSC), 22,202 bp of small single-copy region (SSC) and 25,025 bp of two inverted repeat regions (IRs). The complete chloroplast genome of Euryale ferox is also consistent with other chloroplast genomes most plant species. The overall nucleotide composition of chloroplast genome sequence has: A (30.1%), T (30.8%), C (19.9%), G (19.2%) and the total GC content of 39.1%. Its sequence contains 127 genes, including 84 encoding genes, 35 transfer RNA genes and 8 ribosomal RNA genes. As the analysis result, the ML tree presents that Euryale ferox clustered with Nuphar advena belonging to the family Nymphaeaceae in genetic evolution relationship by the maximum likelihood (ML) methods.
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spelling pubmed-77822322021-01-14 Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China Guo, Zhiyong Min, Jie Mitochondrial DNA B Resour Mitogenome Announcement Euryale ferox belongs to the family Nymphaeaceae that has been used as foods and medicines in China. In this study, we had been completed the complete chloroplast genome of Euryale ferox, which is 159,930 bp in length and has four sub-regions. The complete chloroplast genome sequence of Euryale ferox contains 89,678 bp of a large single-copy region (LSC), 22,202 bp of small single-copy region (SSC) and 25,025 bp of two inverted repeat regions (IRs). The complete chloroplast genome of Euryale ferox is also consistent with other chloroplast genomes most plant species. The overall nucleotide composition of chloroplast genome sequence has: A (30.1%), T (30.8%), C (19.9%), G (19.2%) and the total GC content of 39.1%. Its sequence contains 127 genes, including 84 encoding genes, 35 transfer RNA genes and 8 ribosomal RNA genes. As the analysis result, the ML tree presents that Euryale ferox clustered with Nuphar advena belonging to the family Nymphaeaceae in genetic evolution relationship by the maximum likelihood (ML) methods. Taylor & Francis 2020-06-08 /pmc/articles/PMC7782232/ /pubmed/33457802 http://dx.doi.org/10.1080/23802359.2020.1775516 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Guo, Zhiyong
Min, Jie
Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China
title Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China
title_full Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China
title_fullStr Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China
title_full_unstemmed Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China
title_short Characterization the complete chloroplast genome of Euryale ferox (Nymphaeaceae), an medicinal plant species in China
title_sort characterization the complete chloroplast genome of euryale ferox (nymphaeaceae), an medicinal plant species in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782232/
https://www.ncbi.nlm.nih.gov/pubmed/33457802
http://dx.doi.org/10.1080/23802359.2020.1775516
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