Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)

The entire mitochondrial genome sequence of Sphyraena pinguis collected from Korean water was determined by the Next Generation Sequencing (NGS) technology. Its total length was 16,620 bps in length, which possessed the canonical 37 genes in the eukaryotes. Unusual start codon was exclusively found...

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Autores principales: Tabassum, Nazia, Park, Wongyu, Baek, Hae-Ja, Je, Jae-Young, Kim, Hyun-Woo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782257/
https://www.ncbi.nlm.nih.gov/pubmed/33458050
http://dx.doi.org/10.1080/23802359.2020.1797588
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author Tabassum, Nazia
Park, Wongyu
Baek, Hae-Ja
Je, Jae-Young
Kim, Hyun-Woo
author_facet Tabassum, Nazia
Park, Wongyu
Baek, Hae-Ja
Je, Jae-Young
Kim, Hyun-Woo
author_sort Tabassum, Nazia
collection PubMed
description The entire mitochondrial genome sequence of Sphyraena pinguis collected from Korean water was determined by the Next Generation Sequencing (NGS) technology. Its total length was 16,620 bps in length, which possessed the canonical 37 genes in the eukaryotes. Unusual start codon was exclusively found in COX1(GTG), while incomplete stop codons (TA–/T—) were identified in ATP6, COX2, ND3, ND4, and Cyt b. A phylogenetic analysis with currently identified full mitogenomes in Perciformes, S. pinguis was most closely related to S. barracuda (76.87%) and S. jello (76.84%). This mitogenome sequence would explain the evolution of genus Sphyraena.
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spelling pubmed-77822572021-01-14 Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae) Tabassum, Nazia Park, Wongyu Baek, Hae-Ja Je, Jae-Young Kim, Hyun-Woo Mitochondrial DNA B Resour Mitogenome Announcement The entire mitochondrial genome sequence of Sphyraena pinguis collected from Korean water was determined by the Next Generation Sequencing (NGS) technology. Its total length was 16,620 bps in length, which possessed the canonical 37 genes in the eukaryotes. Unusual start codon was exclusively found in COX1(GTG), while incomplete stop codons (TA–/T—) were identified in ATP6, COX2, ND3, ND4, and Cyt b. A phylogenetic analysis with currently identified full mitogenomes in Perciformes, S. pinguis was most closely related to S. barracuda (76.87%) and S. jello (76.84%). This mitogenome sequence would explain the evolution of genus Sphyraena. Taylor & Francis 2020-07-28 /pmc/articles/PMC7782257/ /pubmed/33458050 http://dx.doi.org/10.1080/23802359.2020.1797588 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Tabassum, Nazia
Park, Wongyu
Baek, Hae-Ja
Je, Jae-Young
Kim, Hyun-Woo
Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)
title Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)
title_full Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)
title_fullStr Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)
title_full_unstemmed Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)
title_short Characterization of the complete mitochondrial genome of brown barracuda, Sphyraena pinguis (Perciformes: Sphyraenidae)
title_sort characterization of the complete mitochondrial genome of brown barracuda, sphyraena pinguis (perciformes: sphyraenidae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782257/
https://www.ncbi.nlm.nih.gov/pubmed/33458050
http://dx.doi.org/10.1080/23802359.2020.1797588
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