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The complete chloroplast genome sequence of medicinal plant, Selaginella involvens

Selaginella involvens distributed in East Asia region including China used as traditional medicine, which is an important medicinal plant for preventing and treating asthma. The complete chloroplast genome sequence of S. involvens was characterized from Illumina pair-end sequencing. The chloroplast...

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Detalles Bibliográficos
Autores principales: Qiu, Dangying, Wen, Yangmin, Xie, Yonghua, Lin, Qingfan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782301/
https://www.ncbi.nlm.nih.gov/pubmed/33457877
http://dx.doi.org/10.1080/23802359.2020.1781574
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author Qiu, Dangying
Wen, Yangmin
Xie, Yonghua
Lin, Qingfan
author_facet Qiu, Dangying
Wen, Yangmin
Xie, Yonghua
Lin, Qingfan
author_sort Qiu, Dangying
collection PubMed
description Selaginella involvens distributed in East Asia region including China used as traditional medicine, which is an important medicinal plant for preventing and treating asthma. The complete chloroplast genome sequence of S. involvens was characterized from Illumina pair-end sequencing. The chloroplast genome of S. involvens was 126,340 bp in length, containing a large single-copy region (LSC) of 53,214 bp, a small single-copy region (SSC) of 47,561 bp, and two inverted repeat (IR) regions of 12,796 bp. The overall GC content is 38.70%, whereas the corresponding values of the LSC, SSC, and IR regions are 36.2%, 31.9%, and 43.2%, respectively. The genome contains 80 complete genes, including 61 protein-coding genes (45 protein-coding gene species), nine tRNA genes (six tRNA species), and eight rRNA genes (four rRNA species). The Neighbour-joining phylogenetic analysis showed that S. involvens and Selaginella tamariscina clustered together as sisters to other Salvia species.
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spelling pubmed-77823012021-01-14 The complete chloroplast genome sequence of medicinal plant, Selaginella involvens Qiu, Dangying Wen, Yangmin Xie, Yonghua Lin, Qingfan Mitochondrial DNA B Resour MitoGenome Announcement Selaginella involvens distributed in East Asia region including China used as traditional medicine, which is an important medicinal plant for preventing and treating asthma. The complete chloroplast genome sequence of S. involvens was characterized from Illumina pair-end sequencing. The chloroplast genome of S. involvens was 126,340 bp in length, containing a large single-copy region (LSC) of 53,214 bp, a small single-copy region (SSC) of 47,561 bp, and two inverted repeat (IR) regions of 12,796 bp. The overall GC content is 38.70%, whereas the corresponding values of the LSC, SSC, and IR regions are 36.2%, 31.9%, and 43.2%, respectively. The genome contains 80 complete genes, including 61 protein-coding genes (45 protein-coding gene species), nine tRNA genes (six tRNA species), and eight rRNA genes (four rRNA species). The Neighbour-joining phylogenetic analysis showed that S. involvens and Selaginella tamariscina clustered together as sisters to other Salvia species. Taylor & Francis 2020-06-26 /pmc/articles/PMC7782301/ /pubmed/33457877 http://dx.doi.org/10.1080/23802359.2020.1781574 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle MitoGenome Announcement
Qiu, Dangying
Wen, Yangmin
Xie, Yonghua
Lin, Qingfan
The complete chloroplast genome sequence of medicinal plant, Selaginella involvens
title The complete chloroplast genome sequence of medicinal plant, Selaginella involvens
title_full The complete chloroplast genome sequence of medicinal plant, Selaginella involvens
title_fullStr The complete chloroplast genome sequence of medicinal plant, Selaginella involvens
title_full_unstemmed The complete chloroplast genome sequence of medicinal plant, Selaginella involvens
title_short The complete chloroplast genome sequence of medicinal plant, Selaginella involvens
title_sort complete chloroplast genome sequence of medicinal plant, selaginella involvens
topic MitoGenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782301/
https://www.ncbi.nlm.nih.gov/pubmed/33457877
http://dx.doi.org/10.1080/23802359.2020.1781574
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