Characterization of the complete mitochondrial genome of yellow stripe mutant in onion (Allium cepa L.)

The complete onion of yellow stripe mutant tissues mitochondrial genome was determined and analyzed in this study. The complete sequence length is 324,182 bp, including 37 CDS, 13 tRNA, and G + C content percentage of 45. Compared with the normal onions, 556 SNPs, 279 small indel numbers were detect...

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Detalles Bibliográficos
Autores principales: Hui, Linchong, Chen, Wei, Pan, Meihong, Li, Weiya, He, Linyu, Wang, Jiangying, Miao, Meihua, Yang, Haifeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782306/
https://www.ncbi.nlm.nih.gov/pubmed/33458026
http://dx.doi.org/10.1080/23802359.2020.1797547
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author Hui, Linchong
Chen, Wei
Pan, Meihong
Li, Weiya
He, Linyu
Wang, Jiangying
Miao, Meihua
Yang, Haifeng
author_facet Hui, Linchong
Chen, Wei
Pan, Meihong
Li, Weiya
He, Linyu
Wang, Jiangying
Miao, Meihua
Yang, Haifeng
author_sort Hui, Linchong
collection PubMed
description The complete onion of yellow stripe mutant tissues mitochondrial genome was determined and analyzed in this study. The complete sequence length is 324,182 bp, including 37 CDS, 13 tRNA, and G + C content percentage of 45. Compared with the normal onions, 556 SNPs, 279 small indel numbers were detected, and the mutations of 14 SNPs and two small indels in the exon region affected the translation of proteins. Phylogenetic tree analysis showed that yellow stripe mutant onion is closely clustered with other Allium cepa L. The mutant of onion plays an important role in developing molecular marker-assisted breeding.
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spelling pubmed-77823062021-01-14 Characterization of the complete mitochondrial genome of yellow stripe mutant in onion (Allium cepa L.) Hui, Linchong Chen, Wei Pan, Meihong Li, Weiya He, Linyu Wang, Jiangying Miao, Meihua Yang, Haifeng Mitochondrial DNA B Resour Mitogenome Announcement The complete onion of yellow stripe mutant tissues mitochondrial genome was determined and analyzed in this study. The complete sequence length is 324,182 bp, including 37 CDS, 13 tRNA, and G + C content percentage of 45. Compared with the normal onions, 556 SNPs, 279 small indel numbers were detected, and the mutations of 14 SNPs and two small indels in the exon region affected the translation of proteins. Phylogenetic tree analysis showed that yellow stripe mutant onion is closely clustered with other Allium cepa L. The mutant of onion plays an important role in developing molecular marker-assisted breeding. Taylor & Francis 2020-07-27 /pmc/articles/PMC7782306/ /pubmed/33458026 http://dx.doi.org/10.1080/23802359.2020.1797547 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Hui, Linchong
Chen, Wei
Pan, Meihong
Li, Weiya
He, Linyu
Wang, Jiangying
Miao, Meihua
Yang, Haifeng
Characterization of the complete mitochondrial genome of yellow stripe mutant in onion (Allium cepa L.)
title Characterization of the complete mitochondrial genome of yellow stripe mutant in onion (Allium cepa L.)
title_full Characterization of the complete mitochondrial genome of yellow stripe mutant in onion (Allium cepa L.)
title_fullStr Characterization of the complete mitochondrial genome of yellow stripe mutant in onion (Allium cepa L.)
title_full_unstemmed Characterization of the complete mitochondrial genome of yellow stripe mutant in onion (Allium cepa L.)
title_short Characterization of the complete mitochondrial genome of yellow stripe mutant in onion (Allium cepa L.)
title_sort characterization of the complete mitochondrial genome of yellow stripe mutant in onion (allium cepa l.)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782306/
https://www.ncbi.nlm.nih.gov/pubmed/33458026
http://dx.doi.org/10.1080/23802359.2020.1797547
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