The complete chloroplast genome of Hosta plantaginea (Lam.) Aschers

Hosta plantaginea is an important ornamental and horticultural plant endemic to China. In this study, we generated complete chloroplast genome of H. plantaginea using high-throughput sequencing. The complete chloroplast sequence is a circular molecule of 157,091 bp in size, consisting of a large sin...

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Detalles Bibliográficos
Autores principales: Dou, Jian, Wang, Hongjiang, Li, Mimi, Huang, Shengnan, Tong, Haiying
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782341/
https://www.ncbi.nlm.nih.gov/pubmed/33458185
http://dx.doi.org/10.1080/23802359.2020.1823266
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author Dou, Jian
Wang, Hongjiang
Li, Mimi
Huang, Shengnan
Tong, Haiying
author_facet Dou, Jian
Wang, Hongjiang
Li, Mimi
Huang, Shengnan
Tong, Haiying
author_sort Dou, Jian
collection PubMed
description Hosta plantaginea is an important ornamental and horticultural plant endemic to China. In this study, we generated complete chloroplast genome of H. plantaginea using high-throughput sequencing. The complete chloroplast sequence is a circular molecule of 157,091 bp in size, consisting of a large single copy (LSC, 86,061 bp) and a small single copy (SSC; 18,282 bp) separated by a pair of inverted repeats (IRs; 26,374 bp), The total GC content is 37.8%, with 35.9, 31.7, and 43.0% in LSC, SSC, and IRs, respectively. A total of 132 genes are annotated, including 84 protein-coding genes, 38 tRNAs, 8 rRNAs, and 2 pseudogenes. The phylogenetic analysis revealed that H. plantaginea was formed to be the early diverging species within Hosta.
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spelling pubmed-77823412021-01-14 The complete chloroplast genome of Hosta plantaginea (Lam.) Aschers Dou, Jian Wang, Hongjiang Li, Mimi Huang, Shengnan Tong, Haiying Mitochondrial DNA B Resour Mitogenome Announcement Hosta plantaginea is an important ornamental and horticultural plant endemic to China. In this study, we generated complete chloroplast genome of H. plantaginea using high-throughput sequencing. The complete chloroplast sequence is a circular molecule of 157,091 bp in size, consisting of a large single copy (LSC, 86,061 bp) and a small single copy (SSC; 18,282 bp) separated by a pair of inverted repeats (IRs; 26,374 bp), The total GC content is 37.8%, with 35.9, 31.7, and 43.0% in LSC, SSC, and IRs, respectively. A total of 132 genes are annotated, including 84 protein-coding genes, 38 tRNAs, 8 rRNAs, and 2 pseudogenes. The phylogenetic analysis revealed that H. plantaginea was formed to be the early diverging species within Hosta. Taylor & Francis 2020-09-22 /pmc/articles/PMC7782341/ /pubmed/33458185 http://dx.doi.org/10.1080/23802359.2020.1823266 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Dou, Jian
Wang, Hongjiang
Li, Mimi
Huang, Shengnan
Tong, Haiying
The complete chloroplast genome of Hosta plantaginea (Lam.) Aschers
title The complete chloroplast genome of Hosta plantaginea (Lam.) Aschers
title_full The complete chloroplast genome of Hosta plantaginea (Lam.) Aschers
title_fullStr The complete chloroplast genome of Hosta plantaginea (Lam.) Aschers
title_full_unstemmed The complete chloroplast genome of Hosta plantaginea (Lam.) Aschers
title_short The complete chloroplast genome of Hosta plantaginea (Lam.) Aschers
title_sort complete chloroplast genome of hosta plantaginea (lam.) aschers
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782341/
https://www.ncbi.nlm.nih.gov/pubmed/33458185
http://dx.doi.org/10.1080/23802359.2020.1823266
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