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supFunSim: Spatial Filtering Toolbox for EEG

Brain activity pattern recognition from EEG or MEG signal analysis is one of the most important method in cognitive neuroscience. The supFunSim library is a new Matlab toolbox which generates accurate EEG forward model and implements a collection of spatial filters for EEG source reconstruction, inc...

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Autores principales: Rykaczewski, Krzysztof, Nikadon, Jan, Duch, Włodzisław, Piotrowski, Tomasz
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782389/
https://www.ncbi.nlm.nih.gov/pubmed/32564239
http://dx.doi.org/10.1007/s12021-020-09464-w
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author Rykaczewski, Krzysztof
Nikadon, Jan
Duch, Włodzisław
Piotrowski, Tomasz
author_facet Rykaczewski, Krzysztof
Nikadon, Jan
Duch, Włodzisław
Piotrowski, Tomasz
author_sort Rykaczewski, Krzysztof
collection PubMed
description Brain activity pattern recognition from EEG or MEG signal analysis is one of the most important method in cognitive neuroscience. The supFunSim library is a new Matlab toolbox which generates accurate EEG forward model and implements a collection of spatial filters for EEG source reconstruction, including the linearly constrained minimum-variance (LCMV), eigenspace LCMV, nulling (NL), and minimum-variance pseudo-unbiased reduced-rank (MV-PURE) filters in various versions. It also enables source-level directed connectivity analysis using partial directed coherence (PDC) measure. The supFunSim library is based on the well-known FieldTrip toolbox for EEG and MEG analysis and is written using object-oriented programming paradigm. The resulting modularity of the toolbox enables its simple extensibility. This paper gives a complete overview of the toolbox from both developer and end-user perspectives, including description of the installation process and use cases.
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spelling pubmed-77823892021-01-11 supFunSim: Spatial Filtering Toolbox for EEG Rykaczewski, Krzysztof Nikadon, Jan Duch, Włodzisław Piotrowski, Tomasz Neuroinformatics Software Original Article Brain activity pattern recognition from EEG or MEG signal analysis is one of the most important method in cognitive neuroscience. The supFunSim library is a new Matlab toolbox which generates accurate EEG forward model and implements a collection of spatial filters for EEG source reconstruction, including the linearly constrained minimum-variance (LCMV), eigenspace LCMV, nulling (NL), and minimum-variance pseudo-unbiased reduced-rank (MV-PURE) filters in various versions. It also enables source-level directed connectivity analysis using partial directed coherence (PDC) measure. The supFunSim library is based on the well-known FieldTrip toolbox for EEG and MEG analysis and is written using object-oriented programming paradigm. The resulting modularity of the toolbox enables its simple extensibility. This paper gives a complete overview of the toolbox from both developer and end-user perspectives, including description of the installation process and use cases. Springer US 2020-06-21 2021 /pmc/articles/PMC7782389/ /pubmed/32564239 http://dx.doi.org/10.1007/s12021-020-09464-w Text en © The Author(s) 2020 Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Software Original Article
Rykaczewski, Krzysztof
Nikadon, Jan
Duch, Włodzisław
Piotrowski, Tomasz
supFunSim: Spatial Filtering Toolbox for EEG
title supFunSim: Spatial Filtering Toolbox for EEG
title_full supFunSim: Spatial Filtering Toolbox for EEG
title_fullStr supFunSim: Spatial Filtering Toolbox for EEG
title_full_unstemmed supFunSim: Spatial Filtering Toolbox for EEG
title_short supFunSim: Spatial Filtering Toolbox for EEG
title_sort supfunsim: spatial filtering toolbox for eeg
topic Software Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782389/
https://www.ncbi.nlm.nih.gov/pubmed/32564239
http://dx.doi.org/10.1007/s12021-020-09464-w
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