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Post-mortem genetic investigation of cardiac disease–associated genes in sudden infant death syndrome (SIDS) cases
The sudden infant death syndrome (SIDS) is one of the leading causes of postneonatal infant death. It has been shown that there exists a complex relationship between SIDS and inherited cardiac disease. Next-generation sequencing and surveillance of cardiac channelopathy and cardiomyopathy genes repr...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Springer Berlin Heidelberg
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782403/ https://www.ncbi.nlm.nih.gov/pubmed/32789579 http://dx.doi.org/10.1007/s00414-020-02394-x |
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author | Köffer, Jasmin Scheiper-Welling, Stefanie Verhoff, Marcel A. Bajanowski, Thomas Kauferstein, Silke |
author_facet | Köffer, Jasmin Scheiper-Welling, Stefanie Verhoff, Marcel A. Bajanowski, Thomas Kauferstein, Silke |
author_sort | Köffer, Jasmin |
collection | PubMed |
description | The sudden infant death syndrome (SIDS) is one of the leading causes of postneonatal infant death. It has been shown that there exists a complex relationship between SIDS and inherited cardiac disease. Next-generation sequencing and surveillance of cardiac channelopathy and cardiomyopathy genes represent an important tool for investigating the cause of death in SIDS cases. In the present study, targeted sequencing of 80 genes associated with genetic heart diseases in a cohort of 31 SIDS cases was performed. To determine the spectrum and prevalence of genetic heart disease associated mutations as a potential monogenic basis for SIDS, a stringent variant classification was applied and the percentage of rare (minor allele frequency ≤ 0.2%) and ultra-rare variants (minor allele frequency ≤ 0.005%) in these genes was assessed. With a minor allele frequency of ≤ 0.005%, about 20% of the SIDS cases exhibited a variant of uncertain significance (VUS), but in only 6% of these cases, gene variants proved to be “potentially informative.” The present study shows the importance of careful variant interpretation. Applying stringent criteria misinterpretations are avoided, as the results of genetic analyses may have an important impact of the family members involved. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00414-020-02394-x) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-7782403 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-77824032021-01-11 Post-mortem genetic investigation of cardiac disease–associated genes in sudden infant death syndrome (SIDS) cases Köffer, Jasmin Scheiper-Welling, Stefanie Verhoff, Marcel A. Bajanowski, Thomas Kauferstein, Silke Int J Legal Med Original Article The sudden infant death syndrome (SIDS) is one of the leading causes of postneonatal infant death. It has been shown that there exists a complex relationship between SIDS and inherited cardiac disease. Next-generation sequencing and surveillance of cardiac channelopathy and cardiomyopathy genes represent an important tool for investigating the cause of death in SIDS cases. In the present study, targeted sequencing of 80 genes associated with genetic heart diseases in a cohort of 31 SIDS cases was performed. To determine the spectrum and prevalence of genetic heart disease associated mutations as a potential monogenic basis for SIDS, a stringent variant classification was applied and the percentage of rare (minor allele frequency ≤ 0.2%) and ultra-rare variants (minor allele frequency ≤ 0.005%) in these genes was assessed. With a minor allele frequency of ≤ 0.005%, about 20% of the SIDS cases exhibited a variant of uncertain significance (VUS), but in only 6% of these cases, gene variants proved to be “potentially informative.” The present study shows the importance of careful variant interpretation. Applying stringent criteria misinterpretations are avoided, as the results of genetic analyses may have an important impact of the family members involved. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s00414-020-02394-x) contains supplementary material, which is available to authorized users. Springer Berlin Heidelberg 2020-08-12 2021 /pmc/articles/PMC7782403/ /pubmed/32789579 http://dx.doi.org/10.1007/s00414-020-02394-x Text en © The Author(s) 2020 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Original Article Köffer, Jasmin Scheiper-Welling, Stefanie Verhoff, Marcel A. Bajanowski, Thomas Kauferstein, Silke Post-mortem genetic investigation of cardiac disease–associated genes in sudden infant death syndrome (SIDS) cases |
title | Post-mortem genetic investigation of cardiac disease–associated genes in sudden infant death syndrome (SIDS) cases |
title_full | Post-mortem genetic investigation of cardiac disease–associated genes in sudden infant death syndrome (SIDS) cases |
title_fullStr | Post-mortem genetic investigation of cardiac disease–associated genes in sudden infant death syndrome (SIDS) cases |
title_full_unstemmed | Post-mortem genetic investigation of cardiac disease–associated genes in sudden infant death syndrome (SIDS) cases |
title_short | Post-mortem genetic investigation of cardiac disease–associated genes in sudden infant death syndrome (SIDS) cases |
title_sort | post-mortem genetic investigation of cardiac disease–associated genes in sudden infant death syndrome (sids) cases |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782403/ https://www.ncbi.nlm.nih.gov/pubmed/32789579 http://dx.doi.org/10.1007/s00414-020-02394-x |
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