Characterization of the plastome of Camellia pingguoensis (Theaceae), an endangered and endemic yellow camellia species in China

Camellia pingguoensis D. Fang is a shrub which is found on limestone of karst forests in Guangxi, China. In this study, we characterized the whole plastid genome of C. pingguoensis using Illumina paired-end sequencing reads. The plastome is 156,621 bp in length, containing two copies of inverted rep...

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Autores principales: Wu, Xing, He, Fei-Long, Pan, Hai-Fa, Ning, Zu-Lin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782419/
https://www.ncbi.nlm.nih.gov/pubmed/33458228
http://dx.doi.org/10.1080/23802359.2020.1828000
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author Wu, Xing
He, Fei-Long
Pan, Hai-Fa
Ning, Zu-Lin
author_facet Wu, Xing
He, Fei-Long
Pan, Hai-Fa
Ning, Zu-Lin
author_sort Wu, Xing
collection PubMed
description Camellia pingguoensis D. Fang is a shrub which is found on limestone of karst forests in Guangxi, China. In this study, we characterized the whole plastid genome of C. pingguoensis using Illumina paired-end sequencing reads. The plastome is 156,621 bp in length, containing two copies of inverted repeat (IR) regions (26,046 bp), a large-single copy (LSC) region (86,289 bp), and a small-single copy (SSC) region (18,240 bp). A total of 114 unique genes in the genome has 80 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic result indicates C. pingguoensis is closely related to C. nitidissima C. W. Chi.
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spelling pubmed-77824192021-01-14 Characterization of the plastome of Camellia pingguoensis (Theaceae), an endangered and endemic yellow camellia species in China Wu, Xing He, Fei-Long Pan, Hai-Fa Ning, Zu-Lin Mitochondrial DNA B Resour Mitogenome Announcement Camellia pingguoensis D. Fang is a shrub which is found on limestone of karst forests in Guangxi, China. In this study, we characterized the whole plastid genome of C. pingguoensis using Illumina paired-end sequencing reads. The plastome is 156,621 bp in length, containing two copies of inverted repeat (IR) regions (26,046 bp), a large-single copy (LSC) region (86,289 bp), and a small-single copy (SSC) region (18,240 bp). A total of 114 unique genes in the genome has 80 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic result indicates C. pingguoensis is closely related to C. nitidissima C. W. Chi. Taylor & Francis 2020-10-07 /pmc/articles/PMC7782419/ /pubmed/33458228 http://dx.doi.org/10.1080/23802359.2020.1828000 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wu, Xing
He, Fei-Long
Pan, Hai-Fa
Ning, Zu-Lin
Characterization of the plastome of Camellia pingguoensis (Theaceae), an endangered and endemic yellow camellia species in China
title Characterization of the plastome of Camellia pingguoensis (Theaceae), an endangered and endemic yellow camellia species in China
title_full Characterization of the plastome of Camellia pingguoensis (Theaceae), an endangered and endemic yellow camellia species in China
title_fullStr Characterization of the plastome of Camellia pingguoensis (Theaceae), an endangered and endemic yellow camellia species in China
title_full_unstemmed Characterization of the plastome of Camellia pingguoensis (Theaceae), an endangered and endemic yellow camellia species in China
title_short Characterization of the plastome of Camellia pingguoensis (Theaceae), an endangered and endemic yellow camellia species in China
title_sort characterization of the plastome of camellia pingguoensis (theaceae), an endangered and endemic yellow camellia species in china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782419/
https://www.ncbi.nlm.nih.gov/pubmed/33458228
http://dx.doi.org/10.1080/23802359.2020.1828000
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