Characterization of the complete chloroplast genome of Trachycarpus fortunei

Trachycarpus fortunei (Hook.) H. Wendl. (Fam.: Palmae; Gen.: Trachycarpus) is an evergreen tree that is widely distributed in China. In this study, T. fortunei complete chloroplast (cp) genome was assembled. The total cp genome size of T. fortunei was 158,613 bp in length, containing a large single-...

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Autores principales: Feng, Xiao, Yang, Zhao, Xiu-Rong, Wang, Hong Hong, Tian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782514/
https://www.ncbi.nlm.nih.gov/pubmed/33458075
http://dx.doi.org/10.1080/23802359.2020.1800432
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author Feng, Xiao
Yang, Zhao
Xiu-Rong, Wang
Hong Hong, Tian
author_facet Feng, Xiao
Yang, Zhao
Xiu-Rong, Wang
Hong Hong, Tian
author_sort Feng, Xiao
collection PubMed
description Trachycarpus fortunei (Hook.) H. Wendl. (Fam.: Palmae; Gen.: Trachycarpus) is an evergreen tree that is widely distributed in China. In this study, T. fortunei complete chloroplast (cp) genome was assembled. The total cp genome size of T. fortunei was 158,613 bp in length, containing a large single-copy region of 86,422 bp, a small single-copy region of 17,847 bp, and a pair of inverted repeat regions of 27,172 bp. The overall GC-content of T. fortunei cp genome was 37.21%. It encodes a total of 109 unique genes, including 79 protein-coding genes, 26 tRNA genes, four rRNA genes. Twelve genes contain a single intron and 11 genes have two introns. Phylogenetic analysis results reveal that T. fortunei was closely related to Chamaerops humilis.
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spelling pubmed-77825142021-01-14 Characterization of the complete chloroplast genome of Trachycarpus fortunei Feng, Xiao Yang, Zhao Xiu-Rong, Wang Hong Hong, Tian Mitochondrial DNA B Resour Mitogenome Announcement Trachycarpus fortunei (Hook.) H. Wendl. (Fam.: Palmae; Gen.: Trachycarpus) is an evergreen tree that is widely distributed in China. In this study, T. fortunei complete chloroplast (cp) genome was assembled. The total cp genome size of T. fortunei was 158,613 bp in length, containing a large single-copy region of 86,422 bp, a small single-copy region of 17,847 bp, and a pair of inverted repeat regions of 27,172 bp. The overall GC-content of T. fortunei cp genome was 37.21%. It encodes a total of 109 unique genes, including 79 protein-coding genes, 26 tRNA genes, four rRNA genes. Twelve genes contain a single intron and 11 genes have two introns. Phylogenetic analysis results reveal that T. fortunei was closely related to Chamaerops humilis. Taylor & Francis 2020-07-31 /pmc/articles/PMC7782514/ /pubmed/33458075 http://dx.doi.org/10.1080/23802359.2020.1800432 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Feng, Xiao
Yang, Zhao
Xiu-Rong, Wang
Hong Hong, Tian
Characterization of the complete chloroplast genome of Trachycarpus fortunei
title Characterization of the complete chloroplast genome of Trachycarpus fortunei
title_full Characterization of the complete chloroplast genome of Trachycarpus fortunei
title_fullStr Characterization of the complete chloroplast genome of Trachycarpus fortunei
title_full_unstemmed Characterization of the complete chloroplast genome of Trachycarpus fortunei
title_short Characterization of the complete chloroplast genome of Trachycarpus fortunei
title_sort characterization of the complete chloroplast genome of trachycarpus fortunei
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782514/
https://www.ncbi.nlm.nih.gov/pubmed/33458075
http://dx.doi.org/10.1080/23802359.2020.1800432
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