Characterization of the chloroplast genome of the Osmanthus didymopetalus

In this study, we assembled the chloroplast genome of Osmanthus didymopetalus (Oleaceae), a rare evergreen tree native to Hainan, China. The genome of O. didymopetalus was 155,155 bp in length and contained a pair of inverted repeats (IR, 25,697–25,704 bp) regions, which were separated by the small...

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Autores principales: Zhao, Changheng, Yang, Qinghua, Zhang, Min, Zhang, Cheng, Wang, Xiaofei, Wang, Xianrong, Li, Yongfu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782516/
https://www.ncbi.nlm.nih.gov/pubmed/33457835
http://dx.doi.org/10.1080/23802359.2020.1778551
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author Zhao, Changheng
Yang, Qinghua
Zhang, Min
Zhang, Cheng
Wang, Xiaofei
Wang, Xianrong
Li, Yongfu
author_facet Zhao, Changheng
Yang, Qinghua
Zhang, Min
Zhang, Cheng
Wang, Xiaofei
Wang, Xianrong
Li, Yongfu
author_sort Zhao, Changheng
collection PubMed
description In this study, we assembled the chloroplast genome of Osmanthus didymopetalus (Oleaceae), a rare evergreen tree native to Hainan, China. The genome of O. didymopetalus was 155,155 bp in length and contained a pair of inverted repeats (IR, 25,697–25,704 bp) regions, which were separated by the small single copy (SSC, 17,591 bp) and the large single copy (LSC, 86,225 bp) regions. The cp genome encoded 133 genes including 88 protein-coding genes, 37 tRNA genes, and eight rRNA ribosomal genes. The overall GC content of O. didymopetalus chloroplast genome is 37.8%. Phylogenetic results showed that O. didymopetalus was more closely to O. yunnanensis, O. fragrans and O. insularis. This study will be beneficial for the evolutionary study and phylogenetic reconstruction of Osmanthus.
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spelling pubmed-77825162021-01-14 Characterization of the chloroplast genome of the Osmanthus didymopetalus Zhao, Changheng Yang, Qinghua Zhang, Min Zhang, Cheng Wang, Xiaofei Wang, Xianrong Li, Yongfu Mitochondrial DNA B Resour Mitogenome Announcement In this study, we assembled the chloroplast genome of Osmanthus didymopetalus (Oleaceae), a rare evergreen tree native to Hainan, China. The genome of O. didymopetalus was 155,155 bp in length and contained a pair of inverted repeats (IR, 25,697–25,704 bp) regions, which were separated by the small single copy (SSC, 17,591 bp) and the large single copy (LSC, 86,225 bp) regions. The cp genome encoded 133 genes including 88 protein-coding genes, 37 tRNA genes, and eight rRNA ribosomal genes. The overall GC content of O. didymopetalus chloroplast genome is 37.8%. Phylogenetic results showed that O. didymopetalus was more closely to O. yunnanensis, O. fragrans and O. insularis. This study will be beneficial for the evolutionary study and phylogenetic reconstruction of Osmanthus. Taylor & Francis 2020-06-19 /pmc/articles/PMC7782516/ /pubmed/33457835 http://dx.doi.org/10.1080/23802359.2020.1778551 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhao, Changheng
Yang, Qinghua
Zhang, Min
Zhang, Cheng
Wang, Xiaofei
Wang, Xianrong
Li, Yongfu
Characterization of the chloroplast genome of the Osmanthus didymopetalus
title Characterization of the chloroplast genome of the Osmanthus didymopetalus
title_full Characterization of the chloroplast genome of the Osmanthus didymopetalus
title_fullStr Characterization of the chloroplast genome of the Osmanthus didymopetalus
title_full_unstemmed Characterization of the chloroplast genome of the Osmanthus didymopetalus
title_short Characterization of the chloroplast genome of the Osmanthus didymopetalus
title_sort characterization of the chloroplast genome of the osmanthus didymopetalus
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782516/
https://www.ncbi.nlm.nih.gov/pubmed/33457835
http://dx.doi.org/10.1080/23802359.2020.1778551
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