Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae

Craniotome Rchb. is a monotypic genus of Lamiaceae. In this study, the complete plastid genome of the species C. furcata (Link) Kuntze was sequenced and assembled. The plastid genome obtained is 152,521 bp in length, including a pair of inverted repeat (IRa and IRb) regions of 25,596 bp, a large sin...

Descripción completa

Detalles Bibliográficos
Autores principales: Wu, Yongbin, Yao, Gang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782610/
https://www.ncbi.nlm.nih.gov/pubmed/33458021
http://dx.doi.org/10.1080/23802359.2020.1793700
_version_ 1783631941706186752
author Wu, Yongbin
Yao, Gang
author_facet Wu, Yongbin
Yao, Gang
author_sort Wu, Yongbin
collection PubMed
description Craniotome Rchb. is a monotypic genus of Lamiaceae. In this study, the complete plastid genome of the species C. furcata (Link) Kuntze was sequenced and assembled. The plastid genome obtained is 152,521 bp in length, including a pair of inverted repeat (IRa and IRb) regions of 25,596 bp, a large single-copy (LSC) region of 83,690 bp, and a small single-copy (SSC) region of 17,639 bp. The genome encoded 113 unique genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. The overall GC content of the genome obtained is 38.29%. The phylogenetic analysis based on 37 plastid genome of Lamiaceae revealed that the genus Craniotome was sister to the Anisomeles-Pogostemon clade with strong support.
format Online
Article
Text
id pubmed-7782610
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77826102021-01-14 Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae Wu, Yongbin Yao, Gang Mitochondrial DNA B Resour Mitogenome Announcement Craniotome Rchb. is a monotypic genus of Lamiaceae. In this study, the complete plastid genome of the species C. furcata (Link) Kuntze was sequenced and assembled. The plastid genome obtained is 152,521 bp in length, including a pair of inverted repeat (IRa and IRb) regions of 25,596 bp, a large single-copy (LSC) region of 83,690 bp, and a small single-copy (SSC) region of 17,639 bp. The genome encoded 113 unique genes, including 79 protein-coding genes, 4 ribosomal RNA genes, and 30 transfer RNA genes. The overall GC content of the genome obtained is 38.29%. The phylogenetic analysis based on 37 plastid genome of Lamiaceae revealed that the genus Craniotome was sister to the Anisomeles-Pogostemon clade with strong support. Taylor & Francis 2020-07-23 /pmc/articles/PMC7782610/ /pubmed/33458021 http://dx.doi.org/10.1080/23802359.2020.1793700 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Wu, Yongbin
Yao, Gang
Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae
title Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae
title_full Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae
title_fullStr Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae
title_full_unstemmed Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae
title_short Characterization of the complete plastid genome of Craniotome Rchb., a monotypic genus of Pogostemoneae, Lamiaceae
title_sort characterization of the complete plastid genome of craniotome rchb., a monotypic genus of pogostemoneae, lamiaceae
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782610/
https://www.ncbi.nlm.nih.gov/pubmed/33458021
http://dx.doi.org/10.1080/23802359.2020.1793700
work_keys_str_mv AT wuyongbin characterizationofthecompleteplastidgenomeofcraniotomerchbamonotypicgenusofpogostemoneaelamiaceae
AT yaogang characterizationofthecompleteplastidgenomeofcraniotomerchbamonotypicgenusofpogostemoneaelamiaceae

Ejemplares similares