The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny

The mitochondrial genome of Phyllodiaptomus diaptomus was sequenced and assembled via Next-Generation Sequencing (NGS) and iterative assembly with a reference seed. The genome is 16446 bp long, A + T biased (69.4%), with 13 protein-coding genes, 22 tRNAs, and 2 rRNA. All protein-coding genes are ini...

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Autores principales: Zhang, Xiaoli, Xu, Shaolin, Liu, Ping, Huang, Qi, Li, Huiming, Dumont, Henri J., Han, Bo-Ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782680/
https://www.ncbi.nlm.nih.gov/pubmed/33457849
http://dx.doi.org/10.1080/23802359.2020.1763863
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author Zhang, Xiaoli
Xu, Shaolin
Liu, Ping
Huang, Qi
Li, Huiming
Dumont, Henri J.
Han, Bo-Ping
author_facet Zhang, Xiaoli
Xu, Shaolin
Liu, Ping
Huang, Qi
Li, Huiming
Dumont, Henri J.
Han, Bo-Ping
author_sort Zhang, Xiaoli
collection PubMed
description The mitochondrial genome of Phyllodiaptomus diaptomus was sequenced and assembled via Next-Generation Sequencing (NGS) and iterative assembly with a reference seed. The genome is 16446 bp long, A + T biased (69.4%), with 13 protein-coding genes, 22 tRNAs, and 2 rRNA. All protein-coding genes are initiated by a typical “ATN” codon. ND1, ND2, ATP6 genes are terminated with “TAG”, the other 10 genes are terminated with “TAA”. This is the first complete mitogenome published in the Diaptomidae. It provides molecular information useful to a better understanding of the phylogeny of calanoids.
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spelling pubmed-77826802021-01-14 The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny Zhang, Xiaoli Xu, Shaolin Liu, Ping Huang, Qi Li, Huiming Dumont, Henri J. Han, Bo-Ping Mitochondrial DNA B Resour Mitogenome Announcement The mitochondrial genome of Phyllodiaptomus diaptomus was sequenced and assembled via Next-Generation Sequencing (NGS) and iterative assembly with a reference seed. The genome is 16446 bp long, A + T biased (69.4%), with 13 protein-coding genes, 22 tRNAs, and 2 rRNA. All protein-coding genes are initiated by a typical “ATN” codon. ND1, ND2, ATP6 genes are terminated with “TAG”, the other 10 genes are terminated with “TAA”. This is the first complete mitogenome published in the Diaptomidae. It provides molecular information useful to a better understanding of the phylogeny of calanoids. Taylor & Francis 2020-06-22 /pmc/articles/PMC7782680/ /pubmed/33457849 http://dx.doi.org/10.1080/23802359.2020.1763863 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Xiaoli
Xu, Shaolin
Liu, Ping
Huang, Qi
Li, Huiming
Dumont, Henri J.
Han, Bo-Ping
The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny
title The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny
title_full The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny
title_fullStr The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny
title_full_unstemmed The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny
title_short The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny
title_sort mitochondrial genome of phyllodiaptomus tunguidus shen & tai, 1964 (copepoda, calanoida) and its phylogeny
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782680/
https://www.ncbi.nlm.nih.gov/pubmed/33457849
http://dx.doi.org/10.1080/23802359.2020.1763863
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