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Complete plastome sequence of Caesalpinia sappan Linnaeus, a dyestuff and medicinal species

Caesalpinia sappan Linnaeus is a great tree of Fabaceae. It is mainly distributed in the Southern provinces of China and Southeast Asian countries. It can be used to extract dyes. The heartwood has dyestuff and medicinal value. There is no study on the genome of C. sappan so far. Here, we report and...

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Autores principales: Li, Lin-Ming, Fu, Jie-Xiong, Song, Xi-Qiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782684/
https://www.ncbi.nlm.nih.gov/pubmed/33457853
http://dx.doi.org/10.1080/23802359.2020.1778579
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author Li, Lin-Ming
Fu, Jie-Xiong
Song, Xi-Qiang
author_facet Li, Lin-Ming
Fu, Jie-Xiong
Song, Xi-Qiang
author_sort Li, Lin-Ming
collection PubMed
description Caesalpinia sappan Linnaeus is a great tree of Fabaceae. It is mainly distributed in the Southern provinces of China and Southeast Asian countries. It can be used to extract dyes. The heartwood has dyestuff and medicinal value. There is no study on the genome of C. sappan so far. Here, we report and characterize the complete plastid genome sequence of C. sappan in an order to provide genomic resources useful for promoting its conservation. The complete chloroplast genome of C. sappan is 160,176 bp in length with a typical quadripartite structure, consisting of a large single-copy region (LSC, 89,710 bp), a single-copy region (SSC, 18,357 bp), and a pair of inverted repeats (IRs, 26,054 bp). There are 129 genes annotated, including 84 unique protein-coding genes, eight unique ribosomal RNA genes, and 37 transfer RNA genes. The overall G/C content in the plastome of C. sappan is 36.0%. The complete plastome sequence of C. sappan will provide a useful resource for the conservation genetics of this species as well as for phylogenetic studies in Apocynaceae.
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spelling pubmed-77826842021-01-14 Complete plastome sequence of Caesalpinia sappan Linnaeus, a dyestuff and medicinal species Li, Lin-Ming Fu, Jie-Xiong Song, Xi-Qiang Mitochondrial DNA B Resour Mitogenome Announcement Caesalpinia sappan Linnaeus is a great tree of Fabaceae. It is mainly distributed in the Southern provinces of China and Southeast Asian countries. It can be used to extract dyes. The heartwood has dyestuff and medicinal value. There is no study on the genome of C. sappan so far. Here, we report and characterize the complete plastid genome sequence of C. sappan in an order to provide genomic resources useful for promoting its conservation. The complete chloroplast genome of C. sappan is 160,176 bp in length with a typical quadripartite structure, consisting of a large single-copy region (LSC, 89,710 bp), a single-copy region (SSC, 18,357 bp), and a pair of inverted repeats (IRs, 26,054 bp). There are 129 genes annotated, including 84 unique protein-coding genes, eight unique ribosomal RNA genes, and 37 transfer RNA genes. The overall G/C content in the plastome of C. sappan is 36.0%. The complete plastome sequence of C. sappan will provide a useful resource for the conservation genetics of this species as well as for phylogenetic studies in Apocynaceae. Taylor & Francis 2020-06-22 /pmc/articles/PMC7782684/ /pubmed/33457853 http://dx.doi.org/10.1080/23802359.2020.1778579 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Li, Lin-Ming
Fu, Jie-Xiong
Song, Xi-Qiang
Complete plastome sequence of Caesalpinia sappan Linnaeus, a dyestuff and medicinal species
title Complete plastome sequence of Caesalpinia sappan Linnaeus, a dyestuff and medicinal species
title_full Complete plastome sequence of Caesalpinia sappan Linnaeus, a dyestuff and medicinal species
title_fullStr Complete plastome sequence of Caesalpinia sappan Linnaeus, a dyestuff and medicinal species
title_full_unstemmed Complete plastome sequence of Caesalpinia sappan Linnaeus, a dyestuff and medicinal species
title_short Complete plastome sequence of Caesalpinia sappan Linnaeus, a dyestuff and medicinal species
title_sort complete plastome sequence of caesalpinia sappan linnaeus, a dyestuff and medicinal species
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782684/
https://www.ncbi.nlm.nih.gov/pubmed/33457853
http://dx.doi.org/10.1080/23802359.2020.1778579
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