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The complete chloroplast genome of Musa acuminata var. chinensis

Musa acuminata var. chinensis is one of the most important wild banana species native to China which has huge potential breeding value by its cold tolerance and disease resistance. In this study, we first reported the complete chloroplast genome of M. acuminata var. chinensis and explore its phyloge...

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Autores principales: Feng, Huimin, Chen, You, Xu, Xiaoxiong, Luo, Hongli, Wu, Yaoting, He, Chaozu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782695/
https://www.ncbi.nlm.nih.gov/pubmed/33457907
http://dx.doi.org/10.1080/23802359.2020.1788462
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author Feng, Huimin
Chen, You
Xu, Xiaoxiong
Luo, Hongli
Wu, Yaoting
He, Chaozu
author_facet Feng, Huimin
Chen, You
Xu, Xiaoxiong
Luo, Hongli
Wu, Yaoting
He, Chaozu
author_sort Feng, Huimin
collection PubMed
description Musa acuminata var. chinensis is one of the most important wild banana species native to China which has huge potential breeding value by its cold tolerance and disease resistance. In this study, we first reported the complete chloroplast genome of M. acuminata var. chinensis and explore its phylogenetic position using a maximum likelihood phylogenetic tree. The chloroplast genome of M. acuminata var. chinensis is 170,402 bp in length and the overall GC content of the whole genome is 36.8%. It consisting of a pair of inverted repeat (IR, 35,320 bp) regions, a large single-copy (LSC, 88,870 bp) and a small single-copy (SSC, 10,900 bp). The chloroplast genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA ribosomal genes. The most genes occur as a single copy, while 23 gene species occur in double copies. Phylogenetic analysis of 7 selected chloroplast genomes revealed that M. acuminata var. chinensis was closely related to M. acuminata ssp. malaccensis. The complete chloroplast genome of M. acuminata var. chinensis will greatly enhance precious gene resources for banana breeding programs in the future.
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spelling pubmed-77826952021-01-14 The complete chloroplast genome of Musa acuminata var. chinensis Feng, Huimin Chen, You Xu, Xiaoxiong Luo, Hongli Wu, Yaoting He, Chaozu Mitochondrial DNA B Resour Mitogenome Announcement Musa acuminata var. chinensis is one of the most important wild banana species native to China which has huge potential breeding value by its cold tolerance and disease resistance. In this study, we first reported the complete chloroplast genome of M. acuminata var. chinensis and explore its phylogenetic position using a maximum likelihood phylogenetic tree. The chloroplast genome of M. acuminata var. chinensis is 170,402 bp in length and the overall GC content of the whole genome is 36.8%. It consisting of a pair of inverted repeat (IR, 35,320 bp) regions, a large single-copy (LSC, 88,870 bp) and a small single-copy (SSC, 10,900 bp). The chloroplast genome contained 112 genes, including 79 protein-coding genes, 29 tRNA genes, and 4 rRNA ribosomal genes. The most genes occur as a single copy, while 23 gene species occur in double copies. Phylogenetic analysis of 7 selected chloroplast genomes revealed that M. acuminata var. chinensis was closely related to M. acuminata ssp. malaccensis. The complete chloroplast genome of M. acuminata var. chinensis will greatly enhance precious gene resources for banana breeding programs in the future. Taylor & Francis 2020-07-07 /pmc/articles/PMC7782695/ /pubmed/33457907 http://dx.doi.org/10.1080/23802359.2020.1788462 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Feng, Huimin
Chen, You
Xu, Xiaoxiong
Luo, Hongli
Wu, Yaoting
He, Chaozu
The complete chloroplast genome of Musa acuminata var. chinensis
title The complete chloroplast genome of Musa acuminata var. chinensis
title_full The complete chloroplast genome of Musa acuminata var. chinensis
title_fullStr The complete chloroplast genome of Musa acuminata var. chinensis
title_full_unstemmed The complete chloroplast genome of Musa acuminata var. chinensis
title_short The complete chloroplast genome of Musa acuminata var. chinensis
title_sort complete chloroplast genome of musa acuminata var. chinensis
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782695/
https://www.ncbi.nlm.nih.gov/pubmed/33457907
http://dx.doi.org/10.1080/23802359.2020.1788462
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