Complete chloroplast genome of Sphaeropteris brunoniana (Cyatheaceae)

Illumina sequencing was employed to determine the complete chloroplast (cp) genome sequence of Sphaeropteris brunoniana (S. brunoniana), which is a relict fern. The cp genome of S. brunoniana is indeed a circular DNA molecule with 156,659 bp. It includes an inverted repeats (IRs) pair with 24,011 bp...

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Autores principales: Zhu, Ming, Zhao, Guohua, Ping, Jingyao, Liang, Yingyi, Feng, Peipei, Su, Yingjuan, Wang, Ting
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782704/
https://www.ncbi.nlm.nih.gov/pubmed/33458010
http://dx.doi.org/10.1080/23802359.2020.1787893
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author Zhu, Ming
Zhao, Guohua
Ping, Jingyao
Liang, Yingyi
Feng, Peipei
Su, Yingjuan
Wang, Ting
author_facet Zhu, Ming
Zhao, Guohua
Ping, Jingyao
Liang, Yingyi
Feng, Peipei
Su, Yingjuan
Wang, Ting
author_sort Zhu, Ming
collection PubMed
description Illumina sequencing was employed to determine the complete chloroplast (cp) genome sequence of Sphaeropteris brunoniana (S. brunoniana), which is a relict fern. The cp genome of S. brunoniana is indeed a circular DNA molecule with 156,659 bp. It includes an inverted repeats (IRs) pair with 24,011 bp each and two single-copy regions with 86,196 bp and 22,441 bp, respectively. Additionally, the genome contains 117 unique genes encoding 85 proteins, 28 tRNAs, four rRNAs. Pseudogenes of ycf66 and trnT-UGU are also detected in this genome.Bayesian phylogenetic tree strongly supports the deduction that S. brunoniana belongs to Cyatheaceae. To date, this is the first cp genome for the genus S. brunoniana.
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spelling pubmed-77827042021-01-14 Complete chloroplast genome of Sphaeropteris brunoniana (Cyatheaceae) Zhu, Ming Zhao, Guohua Ping, Jingyao Liang, Yingyi Feng, Peipei Su, Yingjuan Wang, Ting Mitochondrial DNA B Resour Mitogenome Announcement Illumina sequencing was employed to determine the complete chloroplast (cp) genome sequence of Sphaeropteris brunoniana (S. brunoniana), which is a relict fern. The cp genome of S. brunoniana is indeed a circular DNA molecule with 156,659 bp. It includes an inverted repeats (IRs) pair with 24,011 bp each and two single-copy regions with 86,196 bp and 22,441 bp, respectively. Additionally, the genome contains 117 unique genes encoding 85 proteins, 28 tRNAs, four rRNAs. Pseudogenes of ycf66 and trnT-UGU are also detected in this genome.Bayesian phylogenetic tree strongly supports the deduction that S. brunoniana belongs to Cyatheaceae. To date, this is the first cp genome for the genus S. brunoniana. Taylor & Francis 2020-07-23 /pmc/articles/PMC7782704/ /pubmed/33458010 http://dx.doi.org/10.1080/23802359.2020.1787893 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhu, Ming
Zhao, Guohua
Ping, Jingyao
Liang, Yingyi
Feng, Peipei
Su, Yingjuan
Wang, Ting
Complete chloroplast genome of Sphaeropteris brunoniana (Cyatheaceae)
title Complete chloroplast genome of Sphaeropteris brunoniana (Cyatheaceae)
title_full Complete chloroplast genome of Sphaeropteris brunoniana (Cyatheaceae)
title_fullStr Complete chloroplast genome of Sphaeropteris brunoniana (Cyatheaceae)
title_full_unstemmed Complete chloroplast genome of Sphaeropteris brunoniana (Cyatheaceae)
title_short Complete chloroplast genome of Sphaeropteris brunoniana (Cyatheaceae)
title_sort complete chloroplast genome of sphaeropteris brunoniana (cyatheaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782704/
https://www.ncbi.nlm.nih.gov/pubmed/33458010
http://dx.doi.org/10.1080/23802359.2020.1787893
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