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Machine learning enables design automation of microfluidic flow-focusing droplet generation

Droplet-based microfluidic devices hold immense potential in becoming inexpensive alternatives to existing screening platforms across life science applications, such as enzyme discovery and early cancer detection. However, the lack of a predictive understanding of droplet generation makes engineerin...

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Autores principales: Lashkaripour, Ali, Rodriguez, Christopher, Mehdipour, Noushin, Mardian, Rizki, McIntyre, David, Ortiz, Luis, Campbell, Joshua, Densmore, Douglas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782806/
https://www.ncbi.nlm.nih.gov/pubmed/33397940
http://dx.doi.org/10.1038/s41467-020-20284-z
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author Lashkaripour, Ali
Rodriguez, Christopher
Mehdipour, Noushin
Mardian, Rizki
McIntyre, David
Ortiz, Luis
Campbell, Joshua
Densmore, Douglas
author_facet Lashkaripour, Ali
Rodriguez, Christopher
Mehdipour, Noushin
Mardian, Rizki
McIntyre, David
Ortiz, Luis
Campbell, Joshua
Densmore, Douglas
author_sort Lashkaripour, Ali
collection PubMed
description Droplet-based microfluidic devices hold immense potential in becoming inexpensive alternatives to existing screening platforms across life science applications, such as enzyme discovery and early cancer detection. However, the lack of a predictive understanding of droplet generation makes engineering a droplet-based platform an iterative and resource-intensive process. We present a web-based tool, DAFD, that predicts the performance and enables design automation of flow-focusing droplet generators. We capitalize on machine learning algorithms to predict the droplet diameter and rate with a mean absolute error of less than 10 μm and 20 Hz. This tool delivers a user-specified performance within 4.2% and 11.5% of the desired diameter and rate. We demonstrate that DAFD can be extended by the community to support additional fluid combinations, without requiring extensive machine learning knowledge or large-scale data-sets. This tool will reduce the need for microfluidic expertise and design iterations and facilitate adoption of microfluidics in life sciences.
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spelling pubmed-77828062021-01-14 Machine learning enables design automation of microfluidic flow-focusing droplet generation Lashkaripour, Ali Rodriguez, Christopher Mehdipour, Noushin Mardian, Rizki McIntyre, David Ortiz, Luis Campbell, Joshua Densmore, Douglas Nat Commun Article Droplet-based microfluidic devices hold immense potential in becoming inexpensive alternatives to existing screening platforms across life science applications, such as enzyme discovery and early cancer detection. However, the lack of a predictive understanding of droplet generation makes engineering a droplet-based platform an iterative and resource-intensive process. We present a web-based tool, DAFD, that predicts the performance and enables design automation of flow-focusing droplet generators. We capitalize on machine learning algorithms to predict the droplet diameter and rate with a mean absolute error of less than 10 μm and 20 Hz. This tool delivers a user-specified performance within 4.2% and 11.5% of the desired diameter and rate. We demonstrate that DAFD can be extended by the community to support additional fluid combinations, without requiring extensive machine learning knowledge or large-scale data-sets. This tool will reduce the need for microfluidic expertise and design iterations and facilitate adoption of microfluidics in life sciences. Nature Publishing Group UK 2021-01-04 /pmc/articles/PMC7782806/ /pubmed/33397940 http://dx.doi.org/10.1038/s41467-020-20284-z Text en © The Author(s) 2021 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lashkaripour, Ali
Rodriguez, Christopher
Mehdipour, Noushin
Mardian, Rizki
McIntyre, David
Ortiz, Luis
Campbell, Joshua
Densmore, Douglas
Machine learning enables design automation of microfluidic flow-focusing droplet generation
title Machine learning enables design automation of microfluidic flow-focusing droplet generation
title_full Machine learning enables design automation of microfluidic flow-focusing droplet generation
title_fullStr Machine learning enables design automation of microfluidic flow-focusing droplet generation
title_full_unstemmed Machine learning enables design automation of microfluidic flow-focusing droplet generation
title_short Machine learning enables design automation of microfluidic flow-focusing droplet generation
title_sort machine learning enables design automation of microfluidic flow-focusing droplet generation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782806/
https://www.ncbi.nlm.nih.gov/pubmed/33397940
http://dx.doi.org/10.1038/s41467-020-20284-z
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