Cargando…

The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales)

We completed chloroplast genome of Scapania ampliata Steph., presenting distinct morphological features including yellowish brown, one-celled gemmae, and decurrent dorsal lobe. It is 118,026 bp long and has four subregions: 80,850 bp of large single copy (LSC) and 19,436 bp of small single copy (SSC...

Descripción completa

Detalles Bibliográficos
Autores principales: Choi, Seung Se, Kwon, Woochan, Park, Jongsun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782855/
https://www.ncbi.nlm.nih.gov/pubmed/33457990
http://dx.doi.org/10.1080/23802359.2020.1791011
_version_ 1783631992350310400
author Choi, Seung Se
Kwon, Woochan
Park, Jongsun
author_facet Choi, Seung Se
Kwon, Woochan
Park, Jongsun
author_sort Choi, Seung Se
collection PubMed
description We completed chloroplast genome of Scapania ampliata Steph., presenting distinct morphological features including yellowish brown, one-celled gemmae, and decurrent dorsal lobe. It is 118,026 bp long and has four subregions: 80,850 bp of large single copy (LSC) and 19,436 bp of small single copy (SSC) regions are separated by 8,870 bp of inverted repeat (IR) regions including 130 genes (86 protein-coding genes, 8 ribosomal RNAs, and 36 transfer RNAs). The overall guanine cytosine (GC) content is 34.0% and those in the LSC, SSC, and IR regions are 31.9%, 31.0%, and 46.3%, respectively. Phylogenetic trees show S. ampliata is clustered with Scapania ciliata.
format Online
Article
Text
id pubmed-7782855
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77828552021-01-14 The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales) Choi, Seung Se Kwon, Woochan Park, Jongsun Mitochondrial DNA B Resour Mitogenome Announcement We completed chloroplast genome of Scapania ampliata Steph., presenting distinct morphological features including yellowish brown, one-celled gemmae, and decurrent dorsal lobe. It is 118,026 bp long and has four subregions: 80,850 bp of large single copy (LSC) and 19,436 bp of small single copy (SSC) regions are separated by 8,870 bp of inverted repeat (IR) regions including 130 genes (86 protein-coding genes, 8 ribosomal RNAs, and 36 transfer RNAs). The overall guanine cytosine (GC) content is 34.0% and those in the LSC, SSC, and IR regions are 31.9%, 31.0%, and 46.3%, respectively. Phylogenetic trees show S. ampliata is clustered with Scapania ciliata. Taylor & Francis 2020-07-20 /pmc/articles/PMC7782855/ /pubmed/33457990 http://dx.doi.org/10.1080/23802359.2020.1791011 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Choi, Seung Se
Kwon, Woochan
Park, Jongsun
The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales)
title The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales)
title_full The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales)
title_fullStr The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales)
title_full_unstemmed The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales)
title_short The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales)
title_sort complete chloroplast genome of scapania ampliata steph., 1897 (scapaniaceae, jungermanniales)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782855/
https://www.ncbi.nlm.nih.gov/pubmed/33457990
http://dx.doi.org/10.1080/23802359.2020.1791011
work_keys_str_mv AT choiseungse thecompletechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales
AT kwonwoochan thecompletechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales
AT parkjongsun thecompletechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales
AT choiseungse completechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales
AT kwonwoochan completechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales
AT parkjongsun completechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales