Cargando…
The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales)
We completed chloroplast genome of Scapania ampliata Steph., presenting distinct morphological features including yellowish brown, one-celled gemmae, and decurrent dorsal lobe. It is 118,026 bp long and has four subregions: 80,850 bp of large single copy (LSC) and 19,436 bp of small single copy (SSC...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782855/ https://www.ncbi.nlm.nih.gov/pubmed/33457990 http://dx.doi.org/10.1080/23802359.2020.1791011 |
_version_ | 1783631992350310400 |
---|---|
author | Choi, Seung Se Kwon, Woochan Park, Jongsun |
author_facet | Choi, Seung Se Kwon, Woochan Park, Jongsun |
author_sort | Choi, Seung Se |
collection | PubMed |
description | We completed chloroplast genome of Scapania ampliata Steph., presenting distinct morphological features including yellowish brown, one-celled gemmae, and decurrent dorsal lobe. It is 118,026 bp long and has four subregions: 80,850 bp of large single copy (LSC) and 19,436 bp of small single copy (SSC) regions are separated by 8,870 bp of inverted repeat (IR) regions including 130 genes (86 protein-coding genes, 8 ribosomal RNAs, and 36 transfer RNAs). The overall guanine cytosine (GC) content is 34.0% and those in the LSC, SSC, and IR regions are 31.9%, 31.0%, and 46.3%, respectively. Phylogenetic trees show S. ampliata is clustered with Scapania ciliata. |
format | Online Article Text |
id | pubmed-7782855 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77828552021-01-14 The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales) Choi, Seung Se Kwon, Woochan Park, Jongsun Mitochondrial DNA B Resour Mitogenome Announcement We completed chloroplast genome of Scapania ampliata Steph., presenting distinct morphological features including yellowish brown, one-celled gemmae, and decurrent dorsal lobe. It is 118,026 bp long and has four subregions: 80,850 bp of large single copy (LSC) and 19,436 bp of small single copy (SSC) regions are separated by 8,870 bp of inverted repeat (IR) regions including 130 genes (86 protein-coding genes, 8 ribosomal RNAs, and 36 transfer RNAs). The overall guanine cytosine (GC) content is 34.0% and those in the LSC, SSC, and IR regions are 31.9%, 31.0%, and 46.3%, respectively. Phylogenetic trees show S. ampliata is clustered with Scapania ciliata. Taylor & Francis 2020-07-20 /pmc/articles/PMC7782855/ /pubmed/33457990 http://dx.doi.org/10.1080/23802359.2020.1791011 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Choi, Seung Se Kwon, Woochan Park, Jongsun The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales) |
title | The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales) |
title_full | The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales) |
title_fullStr | The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales) |
title_full_unstemmed | The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales) |
title_short | The complete chloroplast genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales) |
title_sort | complete chloroplast genome of scapania ampliata steph., 1897 (scapaniaceae, jungermanniales) |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782855/ https://www.ncbi.nlm.nih.gov/pubmed/33457990 http://dx.doi.org/10.1080/23802359.2020.1791011 |
work_keys_str_mv | AT choiseungse thecompletechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales AT kwonwoochan thecompletechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales AT parkjongsun thecompletechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales AT choiseungse completechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales AT kwonwoochan completechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales AT parkjongsun completechloroplastgenomeofscapaniaampliatasteph1897scapaniaceaejungermanniales |