Characterization of the complete chloroplast genome of Syringa wolfii

Syringa wolfii (Syringa: Syringeae), an upright shrub, is ornamental species used in urban greenification. In this study, we determined the complete chloroplast (cp) genome of S. wolfii using next-generation sequencing (NGS). The size of the chloroplast genome is 156,571 bp in length, including a la...

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Autores principales: Liu, Jing, Xiong, Peipei, Wang, Wenpei, Wang, Wenqi, Zhang, Wenting, Qin, Yan, Wang, Jiuli
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782856/
https://www.ncbi.nlm.nih.gov/pubmed/33457739
http://dx.doi.org/10.1080/23802359.2020.1763216
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author Liu, Jing
Xiong, Peipei
Wang, Wenpei
Wang, Wenqi
Zhang, Wenting
Qin, Yan
Wang, Jiuli
author_facet Liu, Jing
Xiong, Peipei
Wang, Wenpei
Wang, Wenqi
Zhang, Wenting
Qin, Yan
Wang, Jiuli
author_sort Liu, Jing
collection PubMed
description Syringa wolfii (Syringa: Syringeae), an upright shrub, is ornamental species used in urban greenification. In this study, we determined the complete chloroplast (cp) genome of S. wolfii using next-generation sequencing (NGS). The size of the chloroplast genome is 156,571 bp in length, including a large single-copy region (LSC) of 86,684 bp, a small single-copy region (SSC) of 19,109 bp, and a pair of inverted repeat (IR) regions with 25,362 bp. The GC content of the chloroplast genome was 37.95%. Moreover, a total of 131 functional genes were annotated, including 87 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The neighbor-joining phylogenetic tree suggested that S. wolfii was closely related to S. yunnansis.
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spelling pubmed-77828562021-01-14 Characterization of the complete chloroplast genome of Syringa wolfii Liu, Jing Xiong, Peipei Wang, Wenpei Wang, Wenqi Zhang, Wenting Qin, Yan Wang, Jiuli Mitochondrial DNA B Resour Mitogenome Announcement Syringa wolfii (Syringa: Syringeae), an upright shrub, is ornamental species used in urban greenification. In this study, we determined the complete chloroplast (cp) genome of S. wolfii using next-generation sequencing (NGS). The size of the chloroplast genome is 156,571 bp in length, including a large single-copy region (LSC) of 86,684 bp, a small single-copy region (SSC) of 19,109 bp, and a pair of inverted repeat (IR) regions with 25,362 bp. The GC content of the chloroplast genome was 37.95%. Moreover, a total of 131 functional genes were annotated, including 87 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The neighbor-joining phylogenetic tree suggested that S. wolfii was closely related to S. yunnansis. Taylor & Francis 2020-05-14 /pmc/articles/PMC7782856/ /pubmed/33457739 http://dx.doi.org/10.1080/23802359.2020.1763216 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Liu, Jing
Xiong, Peipei
Wang, Wenpei
Wang, Wenqi
Zhang, Wenting
Qin, Yan
Wang, Jiuli
Characterization of the complete chloroplast genome of Syringa wolfii
title Characterization of the complete chloroplast genome of Syringa wolfii
title_full Characterization of the complete chloroplast genome of Syringa wolfii
title_fullStr Characterization of the complete chloroplast genome of Syringa wolfii
title_full_unstemmed Characterization of the complete chloroplast genome of Syringa wolfii
title_short Characterization of the complete chloroplast genome of Syringa wolfii
title_sort characterization of the complete chloroplast genome of syringa wolfii
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782856/
https://www.ncbi.nlm.nih.gov/pubmed/33457739
http://dx.doi.org/10.1080/23802359.2020.1763216
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