The complete chloroplast genome of Araucaria cunninghamii (Araucariaceae)

The chloroplast genome of the Araucaria cunninghamii has been completely sequenced. The genome size is 146,337 bp, and the overall GC content is 36.7%. This cp genome does not contain cannonical IRs, it encodes a total 122 genes including 82 protein-coding genes, 36 tRNA genes and four rRNA genes. A...

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Autores principales: Ping, Jingyao, Luo, Xin, Zhu, Ming, Zhang, Rongjing, Qian, Chunmei, Su, Yingjuan, Wang, Ting
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782873/
https://www.ncbi.nlm.nih.gov/pubmed/33458008
http://dx.doi.org/10.1080/23802359.2020.1787265
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author Ping, Jingyao
Luo, Xin
Zhu, Ming
Zhang, Rongjing
Qian, Chunmei
Su, Yingjuan
Wang, Ting
author_facet Ping, Jingyao
Luo, Xin
Zhu, Ming
Zhang, Rongjing
Qian, Chunmei
Su, Yingjuan
Wang, Ting
author_sort Ping, Jingyao
collection PubMed
description The chloroplast genome of the Araucaria cunninghamii has been completely sequenced. The genome size is 146,337 bp, and the overall GC content is 36.7%. This cp genome does not contain cannonical IRs, it encodes a total 122 genes including 82 protein-coding genes, 36 tRNA genes and four rRNA genes. Among them, eight protein-coding genes (rpl2, rpl16, petB, petD, rpoC1, atpF, ndhA and ndhB) have two exon, and two genes (rps12 and ycf3) have three exons. Also, trnI-CAU and rrn5 has two copies. The Maximum-likelihood tree shows that A. cunninghamii is sister to A. heterophylla.
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spelling pubmed-77828732021-01-14 The complete chloroplast genome of Araucaria cunninghamii (Araucariaceae) Ping, Jingyao Luo, Xin Zhu, Ming Zhang, Rongjing Qian, Chunmei Su, Yingjuan Wang, Ting Mitochondrial DNA B Resour Mitogenome Announcement The chloroplast genome of the Araucaria cunninghamii has been completely sequenced. The genome size is 146,337 bp, and the overall GC content is 36.7%. This cp genome does not contain cannonical IRs, it encodes a total 122 genes including 82 protein-coding genes, 36 tRNA genes and four rRNA genes. Among them, eight protein-coding genes (rpl2, rpl16, petB, petD, rpoC1, atpF, ndhA and ndhB) have two exon, and two genes (rps12 and ycf3) have three exons. Also, trnI-CAU and rrn5 has two copies. The Maximum-likelihood tree shows that A. cunninghamii is sister to A. heterophylla. Taylor & Francis 2020-07-25 /pmc/articles/PMC7782873/ /pubmed/33458008 http://dx.doi.org/10.1080/23802359.2020.1787265 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Ping, Jingyao
Luo, Xin
Zhu, Ming
Zhang, Rongjing
Qian, Chunmei
Su, Yingjuan
Wang, Ting
The complete chloroplast genome of Araucaria cunninghamii (Araucariaceae)
title The complete chloroplast genome of Araucaria cunninghamii (Araucariaceae)
title_full The complete chloroplast genome of Araucaria cunninghamii (Araucariaceae)
title_fullStr The complete chloroplast genome of Araucaria cunninghamii (Araucariaceae)
title_full_unstemmed The complete chloroplast genome of Araucaria cunninghamii (Araucariaceae)
title_short The complete chloroplast genome of Araucaria cunninghamii (Araucariaceae)
title_sort complete chloroplast genome of araucaria cunninghamii (araucariaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782873/
https://www.ncbi.nlm.nih.gov/pubmed/33458008
http://dx.doi.org/10.1080/23802359.2020.1787265
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