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The complete chloroplast genome sequence of Illigera celebica
Illigera celebica is an evergreen woody vine that belongs to genus Illigera Bl in the family Hernandiaceae and has medicinal value. The complete chloroplast genome of I. celebica was sequenced to determine its phylogenetic location with respect to the other species under the Laurales. Its whole chlo...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2020
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782879/ https://www.ncbi.nlm.nih.gov/pubmed/33457824 http://dx.doi.org/10.1080/23802359.2020.1778562 |
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author | Xin, Yaxuan Xin, Jing Yao, Guoqiong Qu, Yaya Feng, Fayu Song, Yu Sun, Zhenghai |
author_facet | Xin, Yaxuan Xin, Jing Yao, Guoqiong Qu, Yaya Feng, Fayu Song, Yu Sun, Zhenghai |
author_sort | Xin, Yaxuan |
collection | PubMed |
description | Illigera celebica is an evergreen woody vine that belongs to genus Illigera Bl in the family Hernandiaceae and has medicinal value. The complete chloroplast genome of I. celebica was sequenced to determine its phylogenetic location with respect to the other species under the Laurales. Its whole chloroplast genome is 156,123 bp in length, and comprises a large single-copy region (LSC, 84,913 bp), a small single-copy region (SSC,18,775 bp), and a pair of inverted repeats (IRs, 26,217 bp). The overall GC content is 39.2% (LSC, 37.8%; SSC, 33.9%; IR, 43.4%). Maximum likelihood phylogenetic analysise (TVM + F + R2 model) was conducted using 15 complete chloroplast genomes of Laurales, and the results confirmed that Hernandia nymphaeifolia and Wilkiea huegeliana were located in the same lineage. |
format | Online Article Text |
id | pubmed-7782879 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2020 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-77828792021-01-14 The complete chloroplast genome sequence of Illigera celebica Xin, Yaxuan Xin, Jing Yao, Guoqiong Qu, Yaya Feng, Fayu Song, Yu Sun, Zhenghai Mitochondrial DNA B Resour Mitogenome Announcement Illigera celebica is an evergreen woody vine that belongs to genus Illigera Bl in the family Hernandiaceae and has medicinal value. The complete chloroplast genome of I. celebica was sequenced to determine its phylogenetic location with respect to the other species under the Laurales. Its whole chloroplast genome is 156,123 bp in length, and comprises a large single-copy region (LSC, 84,913 bp), a small single-copy region (SSC,18,775 bp), and a pair of inverted repeats (IRs, 26,217 bp). The overall GC content is 39.2% (LSC, 37.8%; SSC, 33.9%; IR, 43.4%). Maximum likelihood phylogenetic analysise (TVM + F + R2 model) was conducted using 15 complete chloroplast genomes of Laurales, and the results confirmed that Hernandia nymphaeifolia and Wilkiea huegeliana were located in the same lineage. Taylor & Francis 2020-06-16 /pmc/articles/PMC7782879/ /pubmed/33457824 http://dx.doi.org/10.1080/23802359.2020.1778562 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Xin, Yaxuan Xin, Jing Yao, Guoqiong Qu, Yaya Feng, Fayu Song, Yu Sun, Zhenghai The complete chloroplast genome sequence of Illigera celebica |
title | The complete chloroplast genome sequence of Illigera celebica |
title_full | The complete chloroplast genome sequence of Illigera celebica |
title_fullStr | The complete chloroplast genome sequence of Illigera celebica |
title_full_unstemmed | The complete chloroplast genome sequence of Illigera celebica |
title_short | The complete chloroplast genome sequence of Illigera celebica |
title_sort | complete chloroplast genome sequence of illigera celebica |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782879/ https://www.ncbi.nlm.nih.gov/pubmed/33457824 http://dx.doi.org/10.1080/23802359.2020.1778562 |
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