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The complete chloroplast genome sequence of Illigera celebica

Illigera celebica is an evergreen woody vine that belongs to genus Illigera Bl in the family Hernandiaceae and has medicinal value. The complete chloroplast genome of I. celebica was sequenced to determine its phylogenetic location with respect to the other species under the Laurales. Its whole chlo...

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Autores principales: Xin, Yaxuan, Xin, Jing, Yao, Guoqiong, Qu, Yaya, Feng, Fayu, Song, Yu, Sun, Zhenghai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782879/
https://www.ncbi.nlm.nih.gov/pubmed/33457824
http://dx.doi.org/10.1080/23802359.2020.1778562
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author Xin, Yaxuan
Xin, Jing
Yao, Guoqiong
Qu, Yaya
Feng, Fayu
Song, Yu
Sun, Zhenghai
author_facet Xin, Yaxuan
Xin, Jing
Yao, Guoqiong
Qu, Yaya
Feng, Fayu
Song, Yu
Sun, Zhenghai
author_sort Xin, Yaxuan
collection PubMed
description Illigera celebica is an evergreen woody vine that belongs to genus Illigera Bl in the family Hernandiaceae and has medicinal value. The complete chloroplast genome of I. celebica was sequenced to determine its phylogenetic location with respect to the other species under the Laurales. Its whole chloroplast genome is 156,123 bp in length, and comprises a large single-copy region (LSC, 84,913 bp), a small single-copy region (SSC,18,775 bp), and a pair of inverted repeats (IRs, 26,217 bp). The overall GC content is 39.2% (LSC, 37.8%; SSC, 33.9%; IR, 43.4%). Maximum likelihood phylogenetic analysise (TVM + F + R2 model) was conducted using 15 complete chloroplast genomes of Laurales, and the results confirmed that Hernandia nymphaeifolia and Wilkiea huegeliana were located in the same lineage.
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spelling pubmed-77828792021-01-14 The complete chloroplast genome sequence of Illigera celebica Xin, Yaxuan Xin, Jing Yao, Guoqiong Qu, Yaya Feng, Fayu Song, Yu Sun, Zhenghai Mitochondrial DNA B Resour Mitogenome Announcement Illigera celebica is an evergreen woody vine that belongs to genus Illigera Bl in the family Hernandiaceae and has medicinal value. The complete chloroplast genome of I. celebica was sequenced to determine its phylogenetic location with respect to the other species under the Laurales. Its whole chloroplast genome is 156,123 bp in length, and comprises a large single-copy region (LSC, 84,913 bp), a small single-copy region (SSC,18,775 bp), and a pair of inverted repeats (IRs, 26,217 bp). The overall GC content is 39.2% (LSC, 37.8%; SSC, 33.9%; IR, 43.4%). Maximum likelihood phylogenetic analysise (TVM + F + R2 model) was conducted using 15 complete chloroplast genomes of Laurales, and the results confirmed that Hernandia nymphaeifolia and Wilkiea huegeliana were located in the same lineage. Taylor & Francis 2020-06-16 /pmc/articles/PMC7782879/ /pubmed/33457824 http://dx.doi.org/10.1080/23802359.2020.1778562 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xin, Yaxuan
Xin, Jing
Yao, Guoqiong
Qu, Yaya
Feng, Fayu
Song, Yu
Sun, Zhenghai
The complete chloroplast genome sequence of Illigera celebica
title The complete chloroplast genome sequence of Illigera celebica
title_full The complete chloroplast genome sequence of Illigera celebica
title_fullStr The complete chloroplast genome sequence of Illigera celebica
title_full_unstemmed The complete chloroplast genome sequence of Illigera celebica
title_short The complete chloroplast genome sequence of Illigera celebica
title_sort complete chloroplast genome sequence of illigera celebica
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782879/
https://www.ncbi.nlm.nih.gov/pubmed/33457824
http://dx.doi.org/10.1080/23802359.2020.1778562
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