The complete chloroplast genome of Epimedium pudingense (Berberidaceae), a narrowly distributed plant species in China

Epimedium L. is the largest herbaceous genus of Berberidaceae which comprises more than 60 species. Epimedium pudingense is a rare plant species only narrowly inhabited in the Puding County in the Guizhou Province of China. Here, we first report the complete chloroplast genome of E. pudingense assem...

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Detalles Bibliográficos
Autores principales: Zhang, Yixin, Liu, Xiang, Yao, Yu, Luo, Yanjiao, Yang, Qianru, Zhang, Cheng, Chaoqun, Xu, Suo, Fengmei, Shen, Guoan, Guo, Baolin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782884/
https://www.ncbi.nlm.nih.gov/pubmed/33457886
http://dx.doi.org/10.1080/23802359.2020.1781560
Descripción
Sumario:Epimedium L. is the largest herbaceous genus of Berberidaceae which comprises more than 60 species. Epimedium pudingense is a rare plant species only narrowly inhabited in the Puding County in the Guizhou Province of China. Here, we first report the complete chloroplast genome of E. pudingense assembled from Illumina short-read sequencing data. The chloroplast genome of E. pudingense was 157,325 bp in length, with a total GC content of 36.11%. A total of 112 unique genes were identified, among which are 78 protein-coding genes, 30 tRNA genes and four rRNA genes. The phylogenetic analysis revealed that E. pudingense closely related to E. elachyphyllum. Our study will provide useful fundamental data for further phylogenetic and evolutionary studies of the Epimedium genus.

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