The complete chloroplast genome sequence of Trapa bicornis Osbeck (Lythraceae)

Trapa (Lythraceae) is an aquatic plant genus widely distributed in the old world. Although Trapa species have great edible and medical value, studies related to species identification and utilization are still lacking. Here, we reported the complete chloroplast genome sequence of a cultivated specie...

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Autores principales: Sun, Fangfang, Yin, Yulai, Xue, Bowen, Zhou, Ronghua, Xu, Jun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782891/
https://www.ncbi.nlm.nih.gov/pubmed/33457932
http://dx.doi.org/10.1080/23802359.2020.1788432
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author Sun, Fangfang
Yin, Yulai
Xue, Bowen
Zhou, Ronghua
Xu, Jun
author_facet Sun, Fangfang
Yin, Yulai
Xue, Bowen
Zhou, Ronghua
Xu, Jun
author_sort Sun, Fangfang
collection PubMed
description Trapa (Lythraceae) is an aquatic plant genus widely distributed in the old world. Although Trapa species have great edible and medical value, studies related to species identification and utilization are still lacking. Here, we reported the complete chloroplast genome sequence of a cultivated species, T. bicornis. The chloroplast genome size of T. bicornis was 155,539 bp, consisting of a pair of inverted repeat (IR) regions (24,386 bp), separated by a large single copy (LSC) region (88,493 bp) and a small single copy (SSC) region (18,274 bp). A total of 130 genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenomic analysis supported the monophyly of Trapa, and a sister relationship between T. bicornis and T. natans.
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spelling pubmed-77828912021-01-14 The complete chloroplast genome sequence of Trapa bicornis Osbeck (Lythraceae) Sun, Fangfang Yin, Yulai Xue, Bowen Zhou, Ronghua Xu, Jun Mitochondrial DNA B Resour Mitogenome Announcement Trapa (Lythraceae) is an aquatic plant genus widely distributed in the old world. Although Trapa species have great edible and medical value, studies related to species identification and utilization are still lacking. Here, we reported the complete chloroplast genome sequence of a cultivated species, T. bicornis. The chloroplast genome size of T. bicornis was 155,539 bp, consisting of a pair of inverted repeat (IR) regions (24,386 bp), separated by a large single copy (LSC) region (88,493 bp) and a small single copy (SSC) region (18,274 bp). A total of 130 genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenomic analysis supported the monophyly of Trapa, and a sister relationship between T. bicornis and T. natans. Taylor & Francis 2020-07-11 /pmc/articles/PMC7782891/ /pubmed/33457932 http://dx.doi.org/10.1080/23802359.2020.1788432 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Sun, Fangfang
Yin, Yulai
Xue, Bowen
Zhou, Ronghua
Xu, Jun
The complete chloroplast genome sequence of Trapa bicornis Osbeck (Lythraceae)
title The complete chloroplast genome sequence of Trapa bicornis Osbeck (Lythraceae)
title_full The complete chloroplast genome sequence of Trapa bicornis Osbeck (Lythraceae)
title_fullStr The complete chloroplast genome sequence of Trapa bicornis Osbeck (Lythraceae)
title_full_unstemmed The complete chloroplast genome sequence of Trapa bicornis Osbeck (Lythraceae)
title_short The complete chloroplast genome sequence of Trapa bicornis Osbeck (Lythraceae)
title_sort complete chloroplast genome sequence of trapa bicornis osbeck (lythraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782891/
https://www.ncbi.nlm.nih.gov/pubmed/33457932
http://dx.doi.org/10.1080/23802359.2020.1788432
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