Characterization of the complete chloroplast genome of Corydalis inopinata Prain ex Fedde (Papaveraceae)

The complete chloroplast genome of Corydalis inopinata Prain ex Fedde was assembled and characterized in this study. The chloroplast genome was 181,335 bp in length, consisting of a large single-copy (LSC) region of 91,727 bp, a small single-copy (SSC) region of 1502 bp, and a pair of inverted repea...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Xiaodong, Wang, Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2020
Materias:
Mitogenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782898/
https://www.ncbi.nlm.nih.gov/pubmed/33458142
http://dx.doi.org/10.1080/23802359.2020.1814887
_version_ 1783632002277179392
author Xu, Xiaodong
Wang, Dong
author_facet Xu, Xiaodong
Wang, Dong
author_sort Xu, Xiaodong
collection PubMed
description The complete chloroplast genome of Corydalis inopinata Prain ex Fedde was assembled and characterized in this study. The chloroplast genome was 181,335 bp in length, consisting of a large single-copy (LSC) region of 91,727 bp, a small single-copy (SSC) region of 1502 bp, and a pair of inverted repeat (IR) regions of 44,053 bp. It encoded 110 unique genes, including 68 protein-coding genes, 29 tRNA genes, 4 rRNA genes, and 9 pseudogenes. Phylogenetic analyses by maximum likelihood (ML) and Bayesian inference (BI) revealed that C. inopinata was closely related to C. conspersa Maxim. with full support in the present sampling. The complete plastid genome provided in this work would be useful for elucidating the taxonomy, phylogeny, and evolution of C. inopinata and other related species.
format Online
Article
Text
id pubmed-7782898
institution National Center for Biotechnology Information
language English
publishDate 2020
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-77828982021-01-14 Characterization of the complete chloroplast genome of Corydalis inopinata Prain ex Fedde (Papaveraceae) Xu, Xiaodong Wang, Dong Mitochondrial DNA B Resour Mitogenome Announcement The complete chloroplast genome of Corydalis inopinata Prain ex Fedde was assembled and characterized in this study. The chloroplast genome was 181,335 bp in length, consisting of a large single-copy (LSC) region of 91,727 bp, a small single-copy (SSC) region of 1502 bp, and a pair of inverted repeat (IR) regions of 44,053 bp. It encoded 110 unique genes, including 68 protein-coding genes, 29 tRNA genes, 4 rRNA genes, and 9 pseudogenes. Phylogenetic analyses by maximum likelihood (ML) and Bayesian inference (BI) revealed that C. inopinata was closely related to C. conspersa Maxim. with full support in the present sampling. The complete plastid genome provided in this work would be useful for elucidating the taxonomy, phylogeny, and evolution of C. inopinata and other related species. Taylor & Francis 2020-08-31 /pmc/articles/PMC7782898/ /pubmed/33458142 http://dx.doi.org/10.1080/23802359.2020.1814887 Text en © 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Xu, Xiaodong
Wang, Dong
Characterization of the complete chloroplast genome of Corydalis inopinata Prain ex Fedde (Papaveraceae)
title Characterization of the complete chloroplast genome of Corydalis inopinata Prain ex Fedde (Papaveraceae)
title_full Characterization of the complete chloroplast genome of Corydalis inopinata Prain ex Fedde (Papaveraceae)
title_fullStr Characterization of the complete chloroplast genome of Corydalis inopinata Prain ex Fedde (Papaveraceae)
title_full_unstemmed Characterization of the complete chloroplast genome of Corydalis inopinata Prain ex Fedde (Papaveraceae)
title_short Characterization of the complete chloroplast genome of Corydalis inopinata Prain ex Fedde (Papaveraceae)
title_sort characterization of the complete chloroplast genome of corydalis inopinata prain ex fedde (papaveraceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782898/
https://www.ncbi.nlm.nih.gov/pubmed/33458142
http://dx.doi.org/10.1080/23802359.2020.1814887
work_keys_str_mv AT xuxiaodong characterizationofthecompletechloroplastgenomeofcorydalisinopinataprainexfeddepapaveraceae
AT wangdong characterizationofthecompletechloroplastgenomeofcorydalisinopinataprainexfeddepapaveraceae

Ejemplares similares